Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1923 ATGGTTGCAGCTGAAGTAATGCCAGAGCAACCACTTCAAGGAGTTCCAATCCTTGCAAGAGAACCAAGTTTTTCTTCTCCACCCAGAAGATTGGAAGGAAAAGTTGCAATTGTAACTGGTGGTGCTAGAGGAATAGGAGAAGCAACAGTGAGAATGTTTGTGAAGAATGGTGCAAAAGTTGTGATTGGAGATGTTGAAGATTCACTTGGATCAATCCTAGCTGAGACCTTATCACCATTAGCAACATTCATCCATTGTGATGTGAGCAATGAAGAAGATATTGCAAATTTGGTGAATTCAACAATCTCAAAATTTGGACAACTTGACATAATGTTCAACAATGCTGGAGTTCTTGGTAACCAATCAAAGAACAAGAAGAGCATAGTCAACTTTGACCCTGATGAGTTTGACCGGGTCATGAGTGTTAATGTTAAGGGTATGGCATTAGGGATTAAACATGCTGCTAGGGTTATGATTCCTAGAGGGTTTGGTTCCATAATTTCAACTTCTAGTGTTGCCGGTGTTATGGGAGGTCTTGGACCACATGCTTATACAGCTTCAAAACACGCAATAGTTGGATTGACAAAAAATATTGCTTGTGAGTTAGGCACGTATGGGATTAGGGTTAACTGTATTTCACCGTTCGGTGTTGCTACGTCAATGCTTGTGAATGCATGGAAAAATGACGACGACGATGATGATGAAGATGGTGGTGGTGATGTCAACGGAATTAGTTTTGGGTTGCCTTCGCTCGAGGAAGTCGAAAAAATGGAAGGTTTCGTTAGGGGTTTAGCTAATTTGCATGGAACAACTTTGAGGCCTAAGGATATTGCTGAGGCTGCACTTTTTCTTGCTAGTGATGAATCTAGGTATGTTAGTGGTCATAATCTTGTTGTGGATGGTGGTGTCACCTCTTCAAGAAATTGTGTTGGCTTGTAA 939 0.4111 MVAAEVMPEQPLQGVPILAREPSFSSPPRRLEGKVAIVTGGARGIGEATVRMFVKNGAKVVIGDVEDSLGSILAETLSPLATFIHCDVSNEEDIANLVNSTISKFGQLDIMFNNAGVLGNQSKNKKSIVNFDPDEFDRVMSVNVKGMALGIKHAARVMIPRGFGSIISTSSVAGVMGGLGPHAYTASKHAIVGLTKNIACELGTYGIRVNCISPFGVATSMLVNAWKNDDDDDDEDGGGDVNGISFGLPSLEEVEKMEGFVRGLANLHGTTLRPKDIAEAALFLASDESRYVSGHNLVVDGGVTSSRNCVGL* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1923 312 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 4 312 - -
Aev02g1923 312 Gene3D - 25 310 - -
Aev02g1923 312 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 2A-LIKE 4 312 - -
Aev02g1923 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 32 304 IPR036291 -
Aev02g1923 312 PRINTS Glucose/ribitol dehydrogenase family signature 35 52 IPR002347 -
Aev02g1923 312 PRINTS Glucose/ribitol dehydrogenase family signature 184 203 IPR002347 -
Aev02g1923 312 PRINTS Glucose/ribitol dehydrogenase family signature 158 174 IPR002347 -
Aev02g1923 312 PRINTS Glucose/ribitol dehydrogenase family signature 205 222 IPR002347 -
Aev02g1923 312 PRINTS Glucose/ribitol dehydrogenase family signature 267 287 IPR002347 -
Aev02g1923 312 PRINTS Glucose/ribitol dehydrogenase family signature 106 117 IPR002347 -
Aev02g1923 312 Pfam short chain dehydrogenase 34 227 IPR002347 -
Aev02g1923 312 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 106 117 IPR002347 -
Aev02g1923 312 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 203 IPR002347 -
Aev02g1923 312 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 172 IPR002347 -
Aev02g1923 312 Pfam Enoyl-(Acyl carrier protein) reductase 253 304 - -
Aev02g1923 312 CDD secoisolariciresinol-DH_like_SDR_c 30 304 IPR045309 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1923 Aev-Chr2 21071872 21073589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1923 27 304 Acyl Lipid Metabolism Gene Families AT1G63380 31.834 1.46e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1923 - - gmx:100790562 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1923 02 21071872 21073589 Aev02g1923 02 21071872 21073589 ECH
Aev02g1923 02 21071872 21073589 Aev06g3027 06 31829292 31831179 PCT