Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1115 ATGGCAGAGAAATCGTGTATTAAGCGCCTTCAGAAGGAATATAGAGCTCTTTGCAAAGAGCCGGTTTCCCATGTTGTGGCTCGTCCTTCTCCAAATGATATTCTTGAGTGGCATTATGTGTTGGAGGGAAGCGAAGGAACACCGTTTGCAGGTGGATATTACTATGGAAAGATCAAGTTTCCTCCAGAATATCCATACAAACCTCCTGGAATCAGCATGACTACACCTAATGGACGGTTCATGACACAGAAAAAGATCTGCTTGTCTATGAGTGACTTTCATCCAGAAAGTTGGAATCCTATGTGGTCTGTATCAAGCATACTTACAGGACTTCTTTCATTCATGATGGACAACAGTCCAACCACCGGCAGTGTGAACACCACTACTGCCGAGAAGCAACGTCTAGCAAAATCTTCCCTTGCTTTCAATTGTAAGAATGCAACATTCAAGAAAATGTTCCCTGAGTATGTTGATAAGTACAACCAACAGCTAGTTGCTCCTCAGCAGATGTCATTGGAAACGTCTAAATCTAATGATGAAAATTCAAGACCAGTTTTGGAAAAGGCTTCAGATTCGGTGCAGGGCATGAACAGAGTAGATGGTTTGAAGGAAAAGAGAATGATCAAAAAGAAACCATTTCCAACTTGGATGATGTTATTACTCTTGTCCGTCTTTGGGGTGGTAATGGCATTGCCTCTGCTTCAGCTGTGA 711 0.4233 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTTAEKQRLAKSSLAFNCKNATFKKMFPEYVDKYNQQLVAPQQMSLETSKSNDENSRPVLEKASDSVQGMNRVDGLKEKRMIKKKPFPTWMMLLLLSVFGVVMALPLLQL* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1115 236 Gene3D Ubiquitin Conjugating Enzyme 1 179 IPR016135 -
Aev06g1115 236 CDD UBCc 7 157 IPR000608 -
Aev06g1115 236 MobiDBLite consensus disorder prediction 171 190 - -
Aev06g1115 236 PANTHER BNAA06G11590D PROTEIN 3 236 - -
Aev06g1115 236 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Aev06g1115 236 SMART ubc_7 8 162 - -
Aev06g1115 236 Pfam Ubiquitin-conjugating enzyme 9 132 IPR000608 -
Aev06g1115 236 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 236 - -
Aev06g1115 236 SUPERFAMILY UBC-like 5 156 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1115 Aev-Chr6 7437687 7439647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1115 1 236 Miscellaneous Gene Families AT1G17280 76.891 4.28e-135 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1115 K04554 - gmx:100789952 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2875 01 30987919 30989828 Aev06g1115 06 7437687 7439647 PCT