Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2875 ATGGCGGAAAAGTACAACATGAAGAACCCGTCCGTGAAGCGGATTCTCCAGGAGGTCAAGGAGATGCAATCAAACCCTTCTGATGATTTCATGAGCCTACCTCTCGAGGAAAATATATTTGAATGGCAATTTGCGATTAGGGGGCCTCGTGATACTGAATTTGAGGGTGGTATTTATCATGGACGGATCCAGTTGCCTGCAGAATATCCCTTCAAACCTCCTTCGTTTATGTTGTTGACGCCTAATGGTCGTTTTGAGACCCAAACCAAGATTTGCTTGAGCATATCAAATCATCATCCTGAGCATTGGCAACCATCATGGAGCGTAAGGACTGCTTTAACTGCGCTGATCGCATTCATGCCAACCAACCCAAATGGTGCGTTGGGCTCACTAGACTACAAAAAAGAAGAGAGGCGTGTGTTGGCTATTAAATCCCGTGATGCTGCTCCAAGATATGGTACTCCTGACCGTCAAAGACTGATTGATGAGATACACGAGTATATGCTAAGCAAGGCACCCCCTGTTCCAGAACTTAGCCCCTCACAAGCTCCCGAAGAACAACCAAGAATTGAGGCGGCCGAGGCTGAGGCCGAGGCTGATTTGCAAAAGCCTGAGGCTTTACCTACAGGAGAGGGGATAGCAGATCAAGCGGGTGACCAAATTGTTGAGGAACAAGAACATCCTGCCAATGCTAATCTTAATCCTGCACGAGTTGAACCTTCAACAGAGATTCCAGCCAGTGTCTCAAACAATCAGTTACTCCAAAAGTCGGATAAAAGGGTACAAAATGTGAAATCAGAGACAAGGGTCCAAAAACCTGATGATCGCTTGTTCACATTAGCAGCTATTGGACTCACTATAGCAATTGTGGTCCTTTTGCTGAAGAAGTTCATTAAATCTACCGAACATGGTGCAGTTTTCATGAATGGGTCGTAG 936 0.4583 MAEKYNMKNPSVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPRDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALTALIAFMPTNPNGALGSLDYKKEERRVLAIKSRDAAPRYGTPDRQRLIDEIHEYMLSKAPPVPELSPSQAPEEQPRIEAAEAEAEADLQKPEALPTGEGIADQAGDQIVEEQEHPANANLNPARVEPSTEIPASVSNNQLLQKSDKRVQNVKSETRVQKPDDRLFTLAAIGLTIAIVVLLLKKFIKSTEHGAVFMNGS* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2875 311 MobiDBLite consensus disorder prediction 243 258 - -
Aev01g2875 311 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 173 IPR000608 -
Aev01g2875 311 Gene3D Ubiquitin Conjugating Enzyme 1 173 IPR016135 -
Aev01g2875 311 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
Aev01g2875 311 SUPERFAMILY UBC-like 12 134 IPR016135 -
Aev01g2875 311 MobiDBLite consensus disorder prediction 172 212 - -
Aev01g2875 311 PANTHER BNAC01G21910D PROTEIN 6 311 - -
Aev01g2875 311 MobiDBLite consensus disorder prediction 230 258 - -
Aev01g2875 311 CDD UBCc 12 127 IPR000608 -
Aev01g2875 311 SMART ubc_7 13 173 - -
Aev01g2875 311 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2875 Aev-Chr1 30987919 30989828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2875 3 309 Miscellaneous Gene Families AT3G17000 63.125 1.90e-134 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2875 K10578 - gmx:100804291 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2875 01 30987919 30989828 Aev01g2875 01 30987919 30989828 ECH
Aev01g2875 01 30987919 30989828 Aev06g1115 06 7437687 7439647 PCT