Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1035 ATGGAAGGAAAAGCGAAGAATGGCCTCCTCTTCTCAGCTACACTCATGGCCTTCTTCCTCTTTCTCTCCACTGCCACCACCACCACCACTGCCTCTCACTCATCTAACTTCCAAACACTAGTCCTCAACTCTCTCCCACACCCACCCACGCTCTCATGGCCCGAATCCGAAGCTGCCCTCTCGGAGCCCCAATCCATAGAACCCGACCCGGAGTCCTCCACCACTCTCTCACTCGATCTCCACCACGTAGACGCGCTCTCTTCCACCAAAACCCCAGAGCAGCTTTTCCACCTTAGGCTCCAACGTGACGCTGCCAGAGTCCAATCCCTCATCTCCATTGCCACCAACCTCCCGCCACCCAACAGGACCCGCGGCCACAGATCCGGCTTGGGTTTCAGCAGCTCCATAATCTCCGGCCTAGCACAGGGCAGCGGCGAGTACTTCACGCGCCTGGGCGTCGGAACCCCAGCCAGGTACGTCTACATGGTCCTCGACACCGGAAGCGACGTCGTCTGGCTCCAGTGTGCCCCATGCAGAAAATGCTACTCCCAAGCCGATCCAGTTTTCGACCCTACCAAATCAAGCACCTACGCCGGAATCCCCTGTGGCGCCCCACTCTGCCGGCGGCTCGACTCTCAGGGATGCAACAGGAACAAGGTTTGTCAGTATCAGGTTTCATACGGAGACGGTTCCTTCACCTTCGGAGATTTCTCCACCGAAACGCTGACGTTTCGAAGGAGGCGCGTTGCGCGCGTCGCTCTCGGCTGTGGTCATGACAACGAGGGCCTCTTCGTGGGCGCTGCGGGCTTGCTGGGCTTGGGCCGTGGAAGGTTGTCATTTCCTGTCCAAACGGGCCGCCGGTTCAACTCGAAGTTCTCTTACTGCCTCGTGGACCGGTCAGCTTCTTCGAAACCTTCTTCAATGGTTTTTGGTGACGGTGCCATTTCGCGAACCGCCCGGTTCACTCCGCTCCTCAAGAACCCTAAGCTCGACACATTCTACTACGTGGAGCTACTCGGGATCAGCGTCGGCGGCACTCCAGTTCGCGGCGTCTCCTCCTCGCTCTTCCGGATCGACGCCACGGGGAACGGCGGTGTTATTATCGATTCAGGTACTTCAGTGACCCGACTGACCCGACCCGCGTACGTCGCTCTGAGAGACGCTTATCGTGCCGGGGCCTCGCATCTGAAGCGGGCGCCGGAGTTCTCGCTTTTTGATACGTGCTACGATCTGTCGGGAATGACGACGGTGCAGGTTCCTAAGGTGGTGCTGCACTTCCGTGGCGCTGATGTGTCGCTTCCGGCGTCGAACTACATGATCCCGGTGGATAACAACGGCAGCTTCTGCTTCGCGTTCGCCGGAACTATGAGCGGTTTGTCCATAATTGGTAACATTCAGCAGCAAGGGTTTCGGGTTGTGTACGATCTTGCGGGCTCCCGGGTCGGGTTTGCCGATAGAGGGTGCGAGTGA 1470 0.5857 MEGKAKNGLLFSATLMAFFLFLSTATTTTTASHSSNFQTLVLNSLPHPPTLSWPESEAALSEPQSIEPDPESSTTLSLDLHHVDALSSTKTPEQLFHLRLQRDAARVQSLISIATNLPPPNRTRGHRSGLGFSSSIISGLAQGSGEYFTRLGVGTPARYVYMVLDTGSDVVWLQCAPCRKCYSQADPVFDPTKSSTYAGIPCGAPLCRRLDSQGCNRNKVCQYQVSYGDGSFTFGDFSTETLTFRRRRVARVALGCGHDNEGLFVGAAGLLGLGRGRLSFPVQTGRRFNSKFSYCLVDRSASSKPSSMVFGDGAISRTARFTPLLKNPKLDTFYYVELLGISVGGTPVRGVSSSLFRIDATGNGGVIIDSGTSVTRLTRPAYVALRDAYRAGASHLKRAPEFSLFDTCYDLSGMTTVQVPKVVLHFRGADVSLPASNYMIPVDNNGSFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAGSRVGFADRGCE* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1035 489 Gene3D Acid Proteases 133 310 IPR021109 -
Aev06g1035 489 PANTHER ASPARTYL PROTEASES 29 489 IPR001461 GO:0004190|GO:0006508
Aev06g1035 489 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 162 173 IPR001969 GO:0004190|GO:0006508
Aev06g1035 489 Pfam Xylanase inhibitor C-terminal 334 484 IPR032799 -
Aev06g1035 489 Pfam Xylanase inhibitor N-terminal 147 312 IPR032861 -
Aev06g1035 489 Gene3D Acid Proteases 311 489 IPR021109 -
Aev06g1035 489 SUPERFAMILY Acid proteases 140 488 IPR021109 -
Aev06g1035 489 MobiDBLite consensus disorder prediction 52 75 - -
Aev06g1035 489 ProSiteProfiles Peptidase family A1 domain profile. 147 484 IPR033121 -
Aev06g1035 489 CDD cnd41_like 146 488 IPR033873 -
Aev06g1035 489 PRINTS Pepsin (A1) aspartic protease family signature 366 377 IPR001461 GO:0004190|GO:0006508
Aev06g1035 489 PRINTS Pepsin (A1) aspartic protease family signature 460 475 IPR001461 GO:0004190|GO:0006508
Aev06g1035 489 PRINTS Pepsin (A1) aspartic protease family signature 153 173 IPR001461 GO:0004190|GO:0006508
Aev06g1035 489 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 29 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1035 Aev-Chr6 6923259 6924728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1035 137 489 Miscellaneous Gene Families AT1G77480 25.840 4.72e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1035 K22683 - gmx:100794269 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1035 06 6923259 6924728 Aev02g0176 02 1260842 1262239 PCT