Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0176 ATGGAAGAAAAAGCAAAAATCAAAGCTTTTTTCTTTCTCTTCTCACTATTTTCACTACTCTCGTTATCTTTCTCAACCTCACTCCAAACCCAAACACTACTCCTCCACCACACACTCCCAAACCCACCCACCCTCTCATGGCCCGAATCCGAATCCACCCAACCCGACCCGGAAAATACCCTCTCCGTTTCCCTTCACCACATAGACGCACTCTCTCCCCAAAATACCCCACAACAACTCTTCCTCCAGCGCCTCCAACGTGACGCAGCCAGGGTCACAAGAGTAACAAACCAAACCGGGTACGGATCCGGGTCGGGTTTCAGTAGCTCAATAGTCTCGGGCATAGCGCAAGGCAGCGGCGAGTACTTCACGCGCCTCGGAGTGGGTACCCCACCACGCTACCTCTACATGGTTCTCGACACAGGAAGCGACGTCGTTTGGCTCCAATGCGCGCCGTGTACTAAATGTTATACGCAATCCGACCCGGTTTTCGACCCGAGAAAGTCGCGAACCTTCGCCGGAGTTCCCTGCGGTTCGCCGCTCTGCCGGCGGCTTGACTCGCCGGGATGTGACGGCCGGAGAAACCTCTGCCAGTACCAGGTATCCTACGGCGACGGCTCGTTCACCACCGGTGAATTCTCCACGGAAACCTTAACCTTCCGACGCGCTGCCGTACCGCGCGTGGCTTTGGGGTGCGGTCACGATAATGAGGGGCTTTTTATTGGTGCTGCGGGCCTGTTGGGCTTGGGCCGTGGAAAACTCTCGTTTCCGGCCCAAACGGGTTCTCTGTACGGAAACAAGTTCTCTTATTGTTTGGTGGACCGGACCGCTTCGAGCAGACCGTCTTCTATTGTTTTTGGAGACACTGCTGTCTCAAGAGCGGCCCGGTTCACTCCTTTGTTGAAAAACCCGAAGCTCGACACGTTTTATTATGTCGAGCTTATGGGAATTAGTGTTGGTGGAACTCCCGTTCGTGGGATTTCTGCTGAGTTTTTCCGGCTTGATCGAACTGGAAATGGAGGAGTTATTATTGATTCCGGCACGTCTGTGACCCGGCTGACCCGGCCCGCTTATGTTGCATTGAGGGATGCGTTTCGGGTCGGGGCAGCCCAGTTGAAGCAGGCGCCTGAATTCTCGTTGTTTGACACGTGTTATGATTTGTCCGGGATGAAGGAGGTGAAGGTTCCGACGGTGGTGCTACATTTCCGGGGTGCTGACGTGTCACTTCCGGCAGGGAATTATTTGATTCCGGTGGATGATAGTGGGACCTATTGTTTTGCTTTTGCTGGAACTATGAGTGGGTTATCTATAATTGGGAATATCCAGCAGCAAGGTTTTCGGGTCGTGTTCGATTTGGCGGGTTATCGGGTCGGGTTTATCCCGAGAGGATGCGTTTGA 1398 0.5365 MEEKAKIKAFFFLFSLFSLLSLSFSTSLQTQTLLLHHTLPNPPTLSWPESESTQPDPENTLSVSLHHIDALSPQNTPQQLFLQRLQRDAARVTRVTNQTGYGSGSGFSSSIVSGIAQGSGEYFTRLGVGTPPRYLYMVLDTGSDVVWLQCAPCTKCYTQSDPVFDPRKSRTFAGVPCGSPLCRRLDSPGCDGRRNLCQYQVSYGDGSFTTGEFSTETLTFRRAAVPRVALGCGHDNEGLFIGAAGLLGLGRGKLSFPAQTGSLYGNKFSYCLVDRTASSRPSSIVFGDTAVSRAARFTPLLKNPKLDTFYYVELMGISVGGTPVRGISAEFFRLDRTGNGGVIIDSGTSVTRLTRPAYVALRDAFRVGAAQLKQAPEFSLFDTCYDLSGMKEVKVPTVVLHFRGADVSLPAGNYLIPVDDSGTYCFAFAGTMSGLSIIGNIQQQGFRVVFDLAGYRVGFIPRGCV* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0176 465 Pfam Xylanase inhibitor C-terminal 310 459 IPR032799 -
Aev02g0176 465 SUPERFAMILY Acid proteases 114 464 IPR021109 -
Aev02g0176 465 CDD cnd41_like 121 464 IPR033873 -
Aev02g0176 465 Gene3D Acid Proteases 286 465 IPR021109 -
Aev02g0176 465 PRINTS Pepsin (A1) aspartic protease family signature 342 353 IPR001461 GO:0004190|GO:0006508
Aev02g0176 465 PRINTS Pepsin (A1) aspartic protease family signature 436 451 IPR001461 GO:0004190|GO:0006508
Aev02g0176 465 PRINTS Pepsin (A1) aspartic protease family signature 128 148 IPR001461 GO:0004190|GO:0006508
Aev02g0176 465 Pfam Xylanase inhibitor N-terminal 122 288 IPR032861 -
Aev02g0176 465 Gene3D Acid Proteases 106 285 IPR021109 -
Aev02g0176 465 PANTHER ASPARTYL PROTEASES 23 464 IPR001461 GO:0004190|GO:0006508
Aev02g0176 465 ProSiteProfiles Peptidase family A1 domain profile. 122 460 IPR033121 -
Aev02g0176 465 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 23 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0176 Aev-Chr2 1260842 1262239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0176 112 464 Miscellaneous Gene Families AT1G77480 28.756 1.99e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0176 K22683 - gmx:100791511 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0176 02 1260842 1262239 Aev02g0176 02 1260842 1262239 ECH
Aev06g1035 06 6923259 6924728 Aev02g0176 02 1260842 1262239 PCT