Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g0063 ATGTCTGGGGAAGATTTTGAAGGACATGATATAGGGTATGTGCCTGAGGACCCTGGTTTCCCACAAAATCATTCTGATGTACTTGATGAGGGGAATGTGTTTGATAGCTCAGGGTTTCCTCAGCTGCTCTCTGATGAACATGATGATGCTGGCAATTTGGCTGATGATGCCATTGCAAATCCTCTTGTGAATGAGTTTGATGGGTATGATGTTGGAGATTTTCCTGTAAACACAGGTTCCCCACTACCACAGGAGGAGCAGATCATTGAGGAACATCATGATGTAGGAGATGTGGTTGAAGAGTTAGGTTCTTCGCAACAACAGGAACGGGGGCCCGAGAATGATTCCAAAGGGAATGAGATTAAAAAGTGGCCTGGGTGGCCGGGAGAGAACGTGTTCAGGATGTTGGTTCCGGTGCAAAAGGTCGGCAGTATTATTGGCCGGAAAGGCGAGTTTATTAAGAAGATCACAGAAGAGACTAGGGCACGAATCAAGATTCTTGATGGTCCACCTGGAACCTTAGAAAGAGCAGTAATGGTTTCTGCAAAGGAAGAGCCAGATCGCCCCATACCACCTGCTATCGAAGGTTTGTTAAGGGTTCATAAACAAGTTGTCAATGTTGACCAAGATTCTACAGATAGCACATCAGGTTCTGGAGGTTCAGTTATCACCAGGCTTCTACTGGCAGATACTCAAGCAGGAAGCTTGATTGGGAAGCAGGGTGCGACTATAAAATCCATTCAAGATGGCTCTGGCTGCACTATACGTGTTCTTGGATCAGAAAACCTGCCAGTTTTTGCTCTGCGAGATGATAGTCTTGTTGAAATACAAGGGGAATCTGCTGGAGTTCACAAGGCGCTTGAACTTATTGCTAGTCATTTACGTAAGTTCTTGGTTGACCGCAGCATTGTTGGAGTATTTGAAACACAGATGCAAAGGCCAGATGTTCGAGTTAACCACAATGTGCCACCACGCCAAAATTGGGTTCCTCCTCCTCCTCAAGGGTTTCCAGCCCCTGGTGGTGTTGGCGGACCTCCTTTTCCACCCAATCATCAATATATGCCGCAACAACATCACTACAATAATTATTACCCACCTGCTGACCTGCCTTCCATGGACAGCCAATTTCATCAGGGTCCACCACCTGCCTACGCCAGGGATGCTTCTGTGCCAATTCATTCGTCAAGTGCACAGCCACAACAATCTGCTGCAACAAAGGTCACGCAGCACATGCAAATTCCTCTATCATACGCAGATGCTGTTATTGGGGCATCAGGTGCAAATATCAGCTACATTCGTCGTGCTAGTGGAGCAAGTGTTACAGTTCAGGAGACAAGGGGTGTGCCAGGGGAGATGACTGTTGAGATAACTGGAACTTCTTCACAGATACAAGCAGCCCAGCAGCTAGTTCAGAATTTCATGGCTGAAGCTGCAAATGCAAGCCAGGATCAAATGGGTGGAGCAGTAAGCCAAAGTTACAATTCATATCCAACTAATGCTCCTGTATATGCTTCTCCACCCACTAGTGCTGCTGGCCAAACAGGCCTTGCACCCTCTGCAGATTATGGCACCATGTATGGTACCAATTATGGCTATTAA 1599 0.4678 MSGEDFEGHDIGYVPEDPGFPQNHSDVLDEGNVFDSSGFPQLLSDEHDDAGNLADDAIANPLVNEFDGYDVGDFPVNTGSPLPQEEQIIEEHHDVGDVVEELGSSQQQERGPENDSKGNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETRARIKILDGPPGTLERAVMVSAKEEPDRPIPPAIEGLLRVHKQVVNVDQDSTDSTSGSGGSVITRLLLADTQAGSLIGKQGATIKSIQDGSGCTIRVLGSENLPVFALRDDSLVEIQGESAGVHKALELIASHLRKFLVDRSIVGVFETQMQRPDVRVNHNVPPRQNWVPPPPQGFPAPGGVGGPPFPPNHQYMPQQHHYNNYYPPADLPSMDSQFHQGPPPAYARDASVPIHSSSAQPQQSAATKVTQHMQIPLSYADAVIGASGANISYIRRASGASVTVQETRGVPGEMTVEITGTSSQIQAAQQLVQNFMAEAANASQDQMGGAVSQSYNSYPTNAPVYASPPTSAAGQTGLAPSADYGTMYGTNYGY* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g0063 532 Coils Coil 463 483 - -
Aev06g0063 532 MobiDBLite consensus disorder prediction 102 124 - -
Aev06g0063 532 ProSiteProfiles Type-1 KH domain profile. 406 470 - -
Aev06g0063 532 PANTHER POLY(RC)-BINDING-LIKE PROTEIN 66 526 - -
Aev06g0063 532 Gene3D K Homology domain, type 1 393 482 IPR036612 GO:0003723
Aev06g0063 532 CDD PCBP_like_KH 132 201 - -
Aev06g0063 532 Gene3D - 130 300 - -
Aev06g0063 532 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 397 477 IPR036612 GO:0003723
Aev06g0063 532 ProSiteProfiles Type-1 KH domain profile. 130 197 - -
Aev06g0063 532 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 213 304 IPR036612 GO:0003723
Aev06g0063 532 CDD PCBP_like_KH 225 291 - -
Aev06g0063 532 ProSiteProfiles Type-1 KH domain profile. 221 290 - -
Aev06g0063 532 MobiDBLite consensus disorder prediction 1 53 - -
Aev06g0063 532 CDD KH-I 408 471 - -
Aev06g0063 532 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 122 185 IPR036612 GO:0003723
Aev06g0063 532 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 66 526 - -
Aev06g0063 532 SMART kh_6 129 202 IPR004087 GO:0003676
Aev06g0063 532 SMART kh_6 220 295 IPR004087 GO:0003676
Aev06g0063 532 SMART kh_6 405 475 IPR004087 GO:0003676
Aev06g0063 532 Pfam KH domain 133 185 IPR004088 GO:0003723
Aev06g0063 532 Pfam KH domain 408 471 IPR004088 GO:0003723
Aev06g0063 532 Pfam KH domain 224 291 IPR004088 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g0063 Aev-Chr6 516390 520287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g0063 K21444 - gmx:100813235 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0063 06 516390 520287 Aev02g0746 02 6213568 6217756 PCT