Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0746 ATGTCTGGGGAAAAATTTGAAGGACAAGATGCAGGCTATGTGCCTGAGAACCTTGAGAACATTGAGAACCTCGATTTTCCGCCAACCCTACCTGATGAACATGATGAACATGGTGAAGGGAATGTGATTGATGAGACAGGGTTTCCTCAATTGCAGCCTGATGAACTTGATGATGAAGGCAATTTGGATGAGGAAGCTGATCTTCCTGAAAATAAGTTTGATGGTCAAGATGTCGAGGATTTGGCATTGTCTGAAGATGCCGTTGCTCCTCTGCAAGAGCAAATGGAGGAGGAGGAGGAGGAGCACCACGATGAGGGAGTTGCGGCTGTGGCAGCTGAGAGTTTTGGTTCTCTGGAGAAACAGGGAGCTGAGGACGATTTGAAAAGAGCCGAGATAAAGAAGTGGCCTGGGTGGCCTGGAGAGAATGTTTTCAGGATGTTGGTTCCGGCGCAAAAGGTTGGCAGTGTTATTGGCCGCAAGGGAGAGTTTATTAAGAAAATCACTGAAGAGACTAAGGCTCGGATTAAAGTTCTTGATGGTCCACCTGGAACCGCAGAAAGAGCAGTAATGGTTTCTGCAAAAGAAGAGCCAGATCGCGACATTCCACCTGCTGTTGAAGGTTTGCTAAGGGTTCATAAACAAATTGTCAATGTTGACCATGATTCTTCAGATAGTGCATCAGGTGCAGGAAACTCAGTTGTTACAAGGCTTCTTGTGGCAGATACTCAAGCAGGAAGCTTGATTGGGAAACAGGGGTCCACTATAAAATCCATTCAAGACGCCACTGGTTGCAATATACGTGTTCTTGGAGCAGAACACCTGCCAGTTTTTGCCTTGCGAGATGATAGTCTCGTTGAGATACAAGGGGAGCCTGCTGGCATTCACAAGACAGTTGAACTTATTGCCCTTCATTTACGCAAGTTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAGATGCAAAGGCCAAATGCTCGACCTACACACAATGCGCCACCACCCCTACATTGGGGTCCTCCTCCTCAAGGGTTTGCCGCTCCTCGCCCTGGTGGTGGACCTGGTTTTGCACCCAATCCTCAATATATGCCACCACCATCTCATAACTACGATAGTTACTACCCACCTGCAGATTTTCCTCCCATGGAGAAGCACCTTCAAGGGCCTCCACCTGCCTATGCGAGGGATACTTCAATGGGAATGAATTCATCCGGTGCTCAGCTGCAGCAGTCTGTTGGGTCTAAGGCCACACAGCACATGCAAATTCCTCTAACATACGCAGATGCTGTTATTGGAGCATCAGGAGCAAATATCAGCTACATTCGTCGTGCTAGCGGAGCAAACGTTACAATTCAGGAGACGAGGGGTGTGCCAGGGGAGATGACCGTCGAGATAAATGGTACCGCTTCACAGATACAGGCAGCTCAACAGCTTGTGCAGAATTTCATGGCTGAAGCTGCAAGTGCGGCGCAAGCACAAGACCCTATGGGAGGAGCAATTAACCAAGGTTACAACAGTTCATACCCGAGTAATGCTCCTGTTTATGCATCTCCACCTTCGAGTGATGCCGGTCATACAGGCCATGTTCCTTCTGCAGATTATGGTCCCGTATATGGCGCCAACTACGGTTATTGA 1638 0.4823 MSGEKFEGQDAGYVPENLENIENLDFPPTLPDEHDEHGEGNVIDETGFPQLQPDELDDEGNLDEEADLPENKFDGQDVEDLALSEDAVAPLQEQMEEEEEEHHDEGVAAVAAESFGSLEKQGAEDDLKRAEIKKWPGWPGENVFRMLVPAQKVGSVIGRKGEFIKKITEETKARIKVLDGPPGTAERAVMVSAKEEPDRDIPPAVEGLLRVHKQIVNVDHDSSDSASGAGNSVVTRLLVADTQAGSLIGKQGSTIKSIQDATGCNIRVLGAEHLPVFALRDDSLVEIQGEPAGIHKTVELIALHLRKFLVDRSIVGVFETQMQRPNARPTHNAPPPLHWGPPPQGFAAPRPGGGPGFAPNPQYMPPPSHNYDSYYPPADFPPMEKHLQGPPPAYARDTSMGMNSSGAQLQQSVGSKATQHMQIPLTYADAVIGASGANISYIRRASGANVTIQETRGVPGEMTVEINGTASQIQAAQQLVQNFMAEAASAAQAQDPMGGAINQGYNSSYPSNAPVYASPPSSDAGHTGHVPSADYGPVYGANYGY* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0746 545 Coils Coil 81 101 - -
Aev02g0746 545 CDD PCBP_like_KH 143 212 - -
Aev02g0746 545 CDD PCBP_like_KH 234 302 - -
Aev02g0746 545 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 76 539 - -
Aev02g0746 545 Gene3D - 141 309 - -
Aev02g0746 545 MobiDBLite consensus disorder prediction 1 106 - -
Aev02g0746 545 ProSiteProfiles Type-1 KH domain profile. 232 301 - -
Aev02g0746 545 MobiDBLite consensus disorder prediction 28 42 - -
Aev02g0746 545 CDD KH-I 418 481 - -
Aev02g0746 545 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 407 487 IPR036612 GO:0003723
Aev02g0746 545 MobiDBLite consensus disorder prediction 329 369 - -
Aev02g0746 545 Pfam KH domain 235 302 IPR004088 GO:0003723
Aev02g0746 545 Pfam KH domain 418 481 IPR004088 GO:0003723
Aev02g0746 545 Pfam KH domain 144 196 IPR004088 GO:0003723
Aev02g0746 545 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 223 314 IPR036612 GO:0003723
Aev02g0746 545 MobiDBLite consensus disorder prediction 325 369 - -
Aev02g0746 545 PANTHER POLY(RC)-BINDING-LIKE PROTEIN 76 539 - -
Aev02g0746 545 MobiDBLite consensus disorder prediction 512 533 - -
Aev02g0746 545 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 134 196 IPR036612 GO:0003723
Aev02g0746 545 SMART kh_6 140 213 IPR004087 GO:0003676
Aev02g0746 545 SMART kh_6 231 306 IPR004087 GO:0003676
Aev02g0746 545 SMART kh_6 415 485 IPR004087 GO:0003676
Aev02g0746 545 ProSiteProfiles Type-1 KH domain profile. 416 480 - -
Aev02g0746 545 ProSiteProfiles Type-1 KH domain profile. 141 208 - -
Aev02g0746 545 Gene3D K Homology domain, type 1 403 493 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0746 Aev-Chr2 6213568 6217756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0746 K21444 - gmx:100818363 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0746 02 6213568 6217756 Aev02g0746 02 6213568 6217756 ECH
Aev06g0063 06 516390 520287 Aev02g0746 02 6213568 6217756 PCT