Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3488 ATGGCCATATGGAGAGGTGAAATTGCAGAGGAAGCAAAGAAGCAGCTATGGCTTGGAGGGCCTATGGTTTTGGTTTGTGTCTTTCAATTCAGTTTACAAATGATATCAATGATGTTTGTTGGTCATTTGGATGAGTTGCTTCTTGCTGGTGCTTCTATGGCTACTTCCTTTGTTAATGTCACTGGTTTCAATGTTATGATGGGTATGTCAAGTGCATTGGACACATTTTGTGGTCAATCATATGGAGCACAACAATACCACATGGTTGGTATACACACACAGAGAGCCATGTTAGTTGTACTGATCACAACAATACCAATTTCCCTGATTTGGGCATATCTGAAACCAATTCTGATTCTTATGCACCAAGACAGAAACATAGCAGCAGAAGCAGAACAATATGCACGGTTTCTGATACCAAGCCTATCAGCAAATGGCATTCTAAGGTGCCTTGTTAAGTTCTTACAGACACAGAACATTGTGTTCCCTATGGTTCTTGCAACAGGCTTCACTAGCCTAGCACATGTTCTTGCATGCTGGATTTTTGTTACAAAACTTGGGTTTGGTACCAAAGGTGCTGCAATTTCAATTTGTATTTCAACTTGGCTTAACACAATTGTGTTAGCAATTTATGTTATGCTCTCCCCTGCATGTAAGACTACTTGGACTGGTTTCTCTAAGGAAGCATTCAATAAGATACCTCACTTTCTCAGGCTTGCTTTTCCTTCTACAGTTATGGTCTGCTTAGAAACATGGACTTTTGAACTGATGGTGCTTCTGTCTGGTGCTCTTCCTAATCCAAAACTGCAAACTTCAGTGCTCTCTATATGCCTTAGTACATCTGGCATATTTTGGATGGTACCCTTTGGAATTAGTATGGCTGGAAGTACAAGGATATCAAATGAACTAGGGGCTGGCCGTCCAAAATCAGCACATTTAGCAGTAAAAGTCTCAATATTCATAGCCTTCATGGTTGGAATTTTAGAATCTGCTATCATTATGTCATTGAGGAAAACTTGGGGCTATGTATTTACCAATGTGGATGAAGTGGTCAAATATGTAACATCCATGATGCCAATTCTTGCAAGCAATGCGTTTGTTGATTCAGTTCAAACAGCATTCCAAGGTATTGCAAGAGGATGTGGTTGGCAGAAGCTTGGGGCATTTGTGAATCTTGGATCTTACTATCTTTTGGGGGTTCCTTTCTCAATTGTGTTAGCTTTTGTACTCCACATGAAAGGAAAGGGACTCTTTCTAGGAATTCTGCTTGCACTTTCTGTCCAAGTTGTATGTTTTCTTCTAGTCACCTTGAACACCAACTGGGGGAAGGAAGCACAGAAAGCATCCACAAGGGTAAGAAGCAGTGGAGCCCAAGTTGATGCAGTTAAGGATGAAGAAAATGTTACTGTCTAA 1413 0.4062 MAIWRGEIAEEAKKQLWLGGPMVLVCVFQFSLQMISMMFVGHLDELLLAGASMATSFVNVTGFNVMMGMSSALDTFCGQSYGAQQYHMVGIHTQRAMLVVLITTIPISLIWAYLKPILILMHQDRNIAAEAEQYARFLIPSLSANGILRCLVKFLQTQNIVFPMVLATGFTSLAHVLACWIFVTKLGFGTKGAAISICISTWLNTIVLAIYVMLSPACKTTWTGFSKEAFNKIPHFLRLAFPSTVMVCLETWTFELMVLLSGALPNPKLQTSVLSICLSTSGIFWMVPFGISMAGSTRISNELGAGRPKSAHLAVKVSIFIAFMVGILESAIIMSLRKTWGYVFTNVDEVVKYVTSMMPILASNAFVDSVQTAFQGIARGCGWQKLGAFVNLGSYYLLGVPFSIVLAFVLHMKGKGLFLGILLALSVQVVCFLLVTLNTNWGKEAQKASTRVRSSGAQVDAVKDEENVTV* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3488 470 PANTHER MULTIDRUG RESISTANCE PROTEIN 2 452 - -
Aev05g3488 470 CDD MATE_eukaryotic 11 447 IPR045069 GO:0042910|GO:1990961
Aev05g3488 470 Pfam MatE 21 181 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev05g3488 470 Pfam MatE 242 404 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev05g3488 470 TIGRFAM matE: MATE efflux family protein 21 417 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev05g3488 470 PANTHER PROTEIN DETOXIFICATION 2 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3488 Aev-Chr5 34139297 34142341 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3488 K03327 - gmx:100793135 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3488 05 34139297 34142341 Aev05g3488 05 34139297 34142341 ECH
Aev05g3488 05 34139297 34142341 Aev03g3416 03 31664054 31666556 PCT