Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3416 ATGTTCTCTGTCTCAATGGACGCAGGATGGGAAAAGCAGCCTCTGGTGGAACATGTGACTGTGGAATGTAATCTCAAAGCTGATGATGATATAGAAAGAACAGAAGAAATCTTAGAAGAAGCAAGGAAGCAGTTATGGCTGGCAGGGCCTCTAGTAATCGTGTCTGTGCTCAATTATTGCCTGCAAATCATATCTGTTATGTTTGTGGGCCATCTCGGCAAACTCGCTCTCTCTAGTGCTTCAATGGCTACCTCTTTTGCCTCTGTCACTGGATTTAGCTTATTGGTGGGAATGGCTAGTGCATTGGATACCTTTTGTGGCCAGTCGTATGGAGCGAAGCAGCATCGTATGTTAGGCATACACATGCAGAGAGCCATGCTTGTGCTTATGTTCGTCAGCATACCCCTTGCAACTATTTGGGCAAACACAAGATCCATTCTGAATTTCCTTGGCCAAGATCCTGAAATATCAGCAGAAGCCGGAAAATATGCTCAGCTAATGATTCCGAGTCTTTTCGCCTATGGTATCCTGCAGTGCCTGAACAGATTCTTGCAGACCCAAAATATCGTATTTCCAATGATGCTCAGCTCTGGAGTTACTGCTTTGCTGCATATTCTTATATGTTGGATTATGGTATTCAAGTCAGGGCTAGGGAGCAGAGGAGCTGCCATAGCAAATGCTATATCTTACTGGTTGAATGTGTTGATACTCTCACTCTATATCAAGTTTTCTCCTTCATGTTGGAAAACTTGGACAGGCTTTTCAAAAGAGGCACTGCATTATATCCCCACTTTTTTGAGGCTTGCCATTCCTTCAGCTGTTATGGTTTGCTTGGAAATGTGGTCATTTGAAATGATGGTTCTCCTTTCTGGCCTTCTTCCAAATCCGAAGCTAGAAACATCAGTGCTTTCTATCTGTCTGAATACTTCATCAACTGTTTGGATGATTGCCTTTGGACTCAGTGGAGCAGTAAGCACTCGTGTCTCGAATGAGCTAGGAGCTGGTCATCCAAGGGCTGCACGTTTAGCTGTGTATTTTGTCTCAGTGATGGCCATTGTTGAGGGAAGTTTTGTTGGAGCAGTGATGATACTAATACGCAATATCTGGGGCTATGCCTATAGCAATGAAGCAGAAGTTGTCAGATATGTTGCAAACATGTTGCCAGTTCTTGCAACATCCATTTTCCTGGATGGATTGCAATGTGTTCTTTCAGGCACGGCTAGAGGATGTGGTAGGCAAAAAATTGGTGCCATAATTAATCTAGGATCATACTATTTAGTTGGGATTCCATCAGCTATCTTATTTGCCTTTGTCATGAACAAAGGTGGCAAGGGTCTTTGGCTGGGGATCGTGTGTGCACTCGTGGTTCAAGTGTCATGTTTTATTACCATTACAACACGTACTGACTGGGAGCAAGAGGCAAAGAAGGCCAAAGACAGAGTGCATGATACAGGGAGAGCAGAGAGCATAGTCTCATGA 1479 0.4388 MFSVSMDAGWEKQPLVEHVTVECNLKADDDIERTEEILEEARKQLWLAGPLVIVSVLNYCLQIISVMFVGHLGKLALSSASMATSFASVTGFSLLVGMASALDTFCGQSYGAKQHRMLGIHMQRAMLVLMFVSIPLATIWANTRSILNFLGQDPEISAEAGKYAQLMIPSLFAYGILQCLNRFLQTQNIVFPMMLSSGVTALLHILICWIMVFKSGLGSRGAAIANAISYWLNVLILSLYIKFSPSCWKTWTGFSKEALHYIPTFLRLAIPSAVMVCLEMWSFEMMVLLSGLLPNPKLETSVLSICLNTSSTVWMIAFGLSGAVSTRVSNELGAGHPRAARLAVYFVSVMAIVEGSFVGAVMILIRNIWGYAYSNEAEVVRYVANMLPVLATSIFLDGLQCVLSGTARGCGRQKIGAIINLGSYYLVGIPSAILFAFVMNKGGKGLWLGIVCALVVQVSCFITITTRTDWEQEAKKAKDRVHDTGRAESIVS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3416 492 Coils Coil 24 44 - -
Aev03g3416 492 CDD MATE_eukaryotic 40 476 IPR045069 GO:0042910|GO:1990961
Aev03g3416 492 Pfam MatE 271 433 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev03g3416 492 Pfam MatE 50 210 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev03g3416 492 PANTHER PROTEIN DETOXIFICATION 23 480 - -
Aev03g3416 492 PANTHER MULTIDRUG RESISTANCE PROTEIN 23 480 - -
Aev03g3416 492 TIGRFAM matE: MATE efflux family protein 50 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3416 Aev-Chr3 31664054 31666556 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3416 K03327 - gmx:100792588 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3488 05 34139297 34142341 Aev03g3416 03 31664054 31666556 PCT