Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1292 ATGGGTAATCTACATTTGGTGATGTTCATCACTCTGTTGCTTCTTCTTGGTGGTTCCTCAGCTGCACCATCCACTACTTCACCTGCAAAGATTGTAAATGGGTTTCTCTCAAATGCCGTCCCAGCTTTCACCAAATGGGTTTGGTCTCTCAAATCGACCACCAAAACGGGGGCACCTGGGAAGAAGTCGATGATGAAGTTTGAGAGTGGTTACACTGTGGAAACTGTGTTTGATGGAAGCAAGCTTGGGATTGAGCCTTATGCAGTTGAAGTGTTGCCTAATGGGGAGCTTCTGATTCTGGATTCGGCTAATAGTAACTTTTATAGAATTTCATCATCGCTTTCTTTGTATAGCAGACCAAAGCTGGTAGCAGGATCTGCTGATGGATATTCTGGACATGTTGATGGGAGGCTTAGGGAGGCTAGGATGAACCACCCTAAGGGTGTAACAGTTGATGACCGGGGAAATATCTATGTTGCAGATACTATGAATATGGCAATTAGGAAAATTAGTGACTCAGGGGTGACAACAATTGCTGGAGGAAAATTGAGTCGCGGAGGGGGCCATGTTGATGGACCGAGTGAAGAGGCTAAATTTTCTAATGACTTTGATGTGGTTTATGTTGGAAGTAGTTGTTCCCTTCTTGTCATAGACAGAGGAAACCAAGCAATCAGGGAGATACAACTTCACTTTGATGACTGTGCTTATCAATATGGAAGTGGATTTCCACTTGGAATTGCAATGCTTGTTGGAGCTGGTTTCTTTGGTTATATGCTGGCATTGCTCCAGCGGAGACTCAGTACAATCGTGGCATCCGAGGACGCTCAGGGTCCAGCAGTGTCGAGCATCCCACCGAGTCAATATCAAAAGCCCTTGAAATCTGTTAGGCCTCCTTTAATTCCATTAGAAGATGAACCCGAGAAGCAAGAAGAAGGTTTCTTTGGATCCATCGGAAAGCTTCTTGCCAATGCCGGCGCATCAGTAGTGGAGATAATGGGAGGGCTATTTCCCGGGTTTAGGAAAAAACAGCAGATCTATCAATTCCAAAACCAACCACTGTACCAGCAACCTCAAAAGCAAGTGAATAATTGGCCTGTGCAAGAAAGCTTTGTGATTCCAGAAGAAGACGAGCCCCCTTCCATCGACACGAGAGCCCCAACCCCTCGAAAAACATATCCTTTCATGTCCAAGGATTCAGAGAAAATGCAACAACTACGGCAAAGTCGAGTGTTCTACAACGGATGGGACAGTGATCTTCAGCAGCAGCAGCAGCAACAACAACAACAAAAACACCACCATAATCATCATCGCCACCAGTACCATTCATCGATCCCTCACACTTACTATGAGCAAAGCCATGAGGCGACCAATGAGATACTGTTCGGGGCAGTGCAGGAGCAGAATGCAAAGCAGGAGTCTGCGGTTATCAAGCCTGTGAACTATGGTGCCTCTCTTTATGATCATAACAATACTATTCGGTCTCGAATGAGTTCCATGGGTTATATGTACAAGAACTGA 1518 0.4539 MGNLHLVMFITLLLLLGGSSAAPSTTSPAKIVNGFLSNAVPAFTKWVWSLKSTTKTGAPGKKSMMKFESGYTVETVFDGSKLGIEPYAVEVLPNGELLILDSANSNFYRISSSLSLYSRPKLVAGSADGYSGHVDGRLREARMNHPKGVTVDDRGNIYVADTMNMAIRKISDSGVTTIAGGKLSRGGGHVDGPSEEAKFSNDFDVVYVGSSCSLLVIDRGNQAIREIQLHFDDCAYQYGSGFPLGIAMLVGAGFFGYMLALLQRRLSTIVASEDAQGPAVSSIPPSQYQKPLKSVRPPLIPLEDEPEKQEEGFFGSIGKLLANAGASVVEIMGGLFPGFRKKQQIYQFQNQPLYQQPQKQVNNWPVQESFVIPEEDEPPSIDTRAPTPRKTYPFMSKDSEKMQQLRQSRVFYNGWDSDLQQQQQQQQQQKHHHNHHRHQYHSSIPHTYYEQSHEATNEILFGAVQEQNAKQESAVIKPVNYGASLYDHNNTIRSRMSSMGYMYKN* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1292 505 Pfam NHL repeat 144 169 IPR001258 GO:0005515
Aev05g1292 505 PANTHER NHL REPEAT PROTEIN 5 504 - -
Aev05g1292 505 Gene3D - 34 228 IPR011042 -
Aev05g1292 505 MobiDBLite consensus disorder prediction 418 442 - -
Aev05g1292 505 MobiDBLite consensus disorder prediction 375 401 - -
Aev05g1292 505 ProSiteProfiles NHL repeat profile. 144 173 IPR001258 GO:0005515
Aev05g1292 505 PANTHER - 5 504 - -
Aev05g1292 505 SUPERFAMILY NHL repeat 72 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1292 Aev-Chr5 9118789 9122033 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1292 - - gmx:100781836 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1292 05 9118789 9122033 Aev03g0538 03 3928704 3931216 PCT