Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0538 ATGGCTTCTCCTTCTGCATTCCTTCTCTTCACCTTCCTCTCTCTTCTTCACGTTCCCAGTTACGCCAAAGTCGTTGTACCCGAAGAGGGTTTCTCTGTGATCACCGTGCTCGACGGCCACAAGCTCAGCATAAACCCTCACTCCATCCTCCAGCGACCCTCTTCCTCCGATCTCATCCTCCTCGATTCCCAAAACAGCGTTTTCTATACTCTCCAATTCCCCATTTCCACAGAAAGTGTTGTCACGAGGTTTTCTGGAAATGGGTCTCCGGGGTATTCAGATGGTGATGTGGGTTCAGCTCAGTTTGACAAACCCAGAAGCTTTGCTGTTGATGTAAGAGGGAATGTGTATGTTGCTGACAGAACAAATGGTGTTATAAGGAAAATCAGCACCAATGGTGTGACCACAATTGCTGGAGTTTTTGCCGAAAAGTCAAGCAAAATGGATGGACCTGCACTAAATGCATCATTTTCAAAAGATTTTGATCTAACTTTCATTCCTGGCCAGTGTGCTTTACTGGTCGCAGATCGTGGGTATCAATTACTTCGTCAGATTAATTTGAAGGAGGAGGATTGTTCCCTTGGGTCTAACTCTGGGCTAAGTGCAGCTATGATTTGGACTCTTGGATTAGGACTTTCATGTTTAGTAGCCTTAGTGGTTGGGATTGCAATTGGCCGGTACATCATCCCTAATACAGCAAGGTTCCAGCCCTTGCCATATCACCGAGACATGGAAGCAATCCCTAACCAGTCTGGGGAAGCTAGTACGGATGTTTTACTTCGCCATCAAAAGCGTAGTTGCTAG 804 0.4627 MASPSAFLLFTFLSLLHVPSYAKVVVPEEGFSVITVLDGHKLSINPHSILQRPSSSDLILLDSQNSVFYTLQFPISTESVVTRFSGNGSPGYSDGDVGSAQFDKPRSFAVDVRGNVYVADRTNGVIRKISTNGVTTIAGVFAEKSSKMDGPALNASFSKDFDLTFIPGQCALLVADRGYQLLRQINLKEEDCSLGSNSGLSAAMIWTLGLGLSCLVALVVGIAIGRYIIPNTARFQPLPYHRDMEAIPNQSGEASTDVLLRHQKRSC* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0538 267 Gene3D - 24 186 IPR011042 -
Aev03g0538 267 SUPERFAMILY NHL repeat 30 188 - -
Aev03g0538 267 PANTHER NHL DOMAIN-CONTAINING PROTEIN 5 237 - -
Aev03g0538 267 PANTHER - 5 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0538 Aev-Chr3 3928704 3931216 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0538 - - lja:Lj2g3v0894320.1 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0538 03 3928704 3931216 Aev03g0538 03 3928704 3931216 ECH
Aev05g1292 05 9118789 9122033 Aev03g0538 03 3928704 3931216 PCT