Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g1286 ATGGCGGCAGAAGAGACAGTGATTGAGTCCAATGATTTTCCAGTGAAGAGGCAAAGGGAGAACGAAACCAATGGCGTCTCAGCTGAATCCACCGACCCTCATGGCCTCTCTACTGTTATTCCTGGCTGGTTCTCCGAAATCAGCCCAATGTGGCCTGGGGAGGCACACTCATTGAAGGTGGAAAAGATTCTGTTTCAAGGAAAATCTGACTTCCAGAATGTCATGGTCTTTCAGTCATCAACTTACGGTAAGGTACTTGTTCTGGATGGAGTCATTCAGCTGACAGAAAGGGATGAATGTGCTTATCAAGAGATGATCACTCATCTTCCACTTTGCTCTATTCCAAATCCCAAAAAGGTTTTGGTTATTGGTGGAGGAGACGGTGGAGTGCTGCGGGAAGTATCACGACATACTTCAGTAGAAAAGATAGACATTTGCGAAATAGACAAGATGGTTGTTGATGTCTCCAAACAGTTTTTCCCTGATATAGCTGTAGGTTTCGATGACCCACGTGTGACCCTTCATATTGGTGATGGAGTGGCATTTTTGAAGGCGGTCCCAGAAGGAACTTACGATGCAGTTATAGTGGATTCATCTGATCCTATTGGTCCTGCTCAAGAGCTTTTTGAAAAGCCATTTTTTCAGTCGGTTGCTAGGGCTCTTCGTCCAGGAGGTGCTGTGTGTACTCAAGCAGAAAGTATTTGGCTTCATATGCATATCATTGAAGACATTGTGGCAAATTGTCGCCAGATATTCAAAGGTTCCGTCAACTATGCTTGGACCACAGTCCCAACATACCCAAGTGGGATGATTGGTTTTATGCTTTGCTCAACTGAGGGGCCGGCTGTTGATTTCAAGCATCCGGTGAATCCCATAGATGAGAATGAGAGTCAGCAGTCAACAAGACCACTGAAATTTTACAACTCTGAGCTTCACACAGCAGCTTTCTGTTTGCCATCATTTGCTAAGAGGGCCATTGCTTCCAAGGCAAATAACTAA 999 0.4494 MAAEETVIESNDFPVKRQRENETNGVSAESTDPHGLSTVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDFQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHTSVEKIDICEIDKMVVDVSKQFFPDIAVGFDDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFQSVARALRPGGAVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPAVDFKHPVNPIDENESQQSTRPLKFYNSELHTAAFCLPSFAKRAIASKANN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g1286 332 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 39 326 IPR029063 -
Aev05g1286 332 CDD AdoMet_MTases 119 230 - -
Aev05g1286 332 PANTHER SPERMIDINE SYNTHASE-RELATED 3 331 - -
Aev05g1286 332 PANTHER SPERMIDINE/SPERMINE SYNTHASE 3 331 IPR001045 GO:0003824
Aev05g1286 332 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 41 278 IPR030374 -
Aev05g1286 332 Pfam Spermidine synthase tetramerisation domain 42 96 IPR035246 -
Aev05g1286 332 Pfam Spermine/spermidine synthase domain 99 286 - -
Aev05g1286 332 TIGRFAM speE: spermidine synthase 43 321 IPR001045 GO:0003824
Aev05g1286 332 Gene3D Vaccinia Virus protein VP39 94 331 IPR029063 -
Aev05g1286 332 Hamap Polyamine aminopropyltransferase [speE]. 42 327 IPR001045 GO:0003824
Aev05g1286 332 PIRSF Spermidine_synth 31 331 IPR030668 GO:0006595
Aev05g1286 332 MobiDBLite consensus disorder prediction 1 32 - -
Aev05g1286 332 Gene3D Spermidine synthase, tetramerisation domain 35 93 IPR037163 -
Aev05g1286 332 ProSitePatterns Polyamine biosynthesis (PABS) domain signature. 120 133 IPR030373 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g1286 Aev-Chr5 9052777 9055933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g1286 K00797 - gmx:100790506 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1286 05 9052777 9055933 Aev05g1286 05 9052777 9055933 ECH
Aev05g1286 05 9052777 9055933 Aev03g0544 03 3980361 3983253 PCT