LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev05g0997	ATGGGGGTGATGGAGAAACCAATGTTGCTCCTGTCGAGGATAGCGAGAGGGAATGGACATGGTGAAGACAGCTCCCCATATTTTGATGGCTGGAAGGCTTATCAAAATGACCCCTTTCATCCCACCAACAATCCCAACGGTGTTATCCAGATGGGTCTTGCAGAAAATCAGCTTACTTGTGATTTGGTTCAACAATGGATAAAGAGTAATCCAAAGGCTTCGATTTGCAGTCCAGAAGGAGTGCGTGATTTCAAGGCCATAGCTAACTTTCAGGATTATCATGGTTTGCCCATGTTCAGACAAGCGGTGGCTAAATTCATGGGAAGAACAAGAGGGAACAGAGTGAGGTTCGATCCTGAACGCATTGTTATGAGCGGAGGAGCAACCGGAGCACATGAGGTTACTGCTTTTTGTCTCGCTGATCCCGGTGACGCTTTCTTAGTCCCCACTCCCTATTATCCTGGATTTGATCGGGATTTGAGATGGAGAACAGGAGTTAAACTTGTCCCAGTAATCTGTGAAAGCTCAAACAATTTCAAGGTGACAAGGACAGCCTTGGAATCTGCTTTTGAAAAAGCCAAAGAGGACAAGATCAGAGTTAAGGGCTTACTCATCACAAATCCATCAAACCCACTTGGAACCATCATGGACAGAGACACCCTCACAACACTATTGACCTTCATCAATGAAAAGCAAATCCACCTTGTATCCGATGAGATATACTCTGCCACTGTTTTCTCCCACCCCTCTTTCACAAGCATTGCTGAGATAATAGAACAGGACAATAATATTGGCGGCGGAATCCAATTCAACCGCGACCTCATTCACATTGTTTATAGTCTTTCAAAGGATATGGGGTTCCCTGGCTTCAGAGTTGGAATCATATACTCTTACAATGATGAAGTGGTGAATTGTGCTCGCAGAATGTCAAGCTTTGGATTAGTCTCATCACAGACACAATATCTTATGGCATCGATGCTTTCTGATGATGAATTTGTGGAACGGTTCTTGGCAGAGAGTGCAGAGAGGCTTGCGAAGAGGTATTGTGTTTTCTCTAAGGGGTTTGCTCAGGTTGGCATAAAGTGCTTGGAGAGCAATGCTGGGCTTTTTCTGTGGATGGATTTGCGTCCTCTTCTCAAGAATCAGACATTTGAGGCCGAAATGGCGCTGTGGCGAGTGATTGTTGATCAGGTAAAGATCAATATTTCCCCTGGCTCTTCATTCCATTGCTCTGAGCCAGGATGGTTCAGGGTGTGCTATGCAAATATGGATGATATGGCTGTTGAAGTTTCTTTGATGAGAATGCGTGGCTTTGTGCTTCAGTACAAGGAGGTCATGATGTCTGAGAACAAGAAACCTTGTACCCTAAGGAACTTGAGCTTCTCATCTAGGAGATTTGAAGATTTGCTGATTTCACCTCACTCTCCTCTAGTGAAAGCCACAATATGA	1449	0.4458	MGVMEKPMLLLSRIARGNGHGEDSSPYFDGWKAYQNDPFHPTNNPNGVIQMGLAENQLTCDLVQQWIKSNPKASICSPEGVRDFKAIANFQDYHGLPMFRQAVAKFMGRTRGNRVRFDPERIVMSGGATGAHEVTAFCLADPGDAFLVPTPYYPGFDRDLRWRTGVKLVPVICESSNNFKVTRTALESAFEKAKEDKIRVKGLLITNPSNPLGTIMDRDTLTTLLTFINEKQIHLVSDEIYSATVFSHPSFTSIAEIIEQDNNIGGGIQFNRDLIHIVYSLSKDMGFPGFRVGIIYSYNDEVVNCARRMSSFGLVSSQTQYLMASMLSDDEFVERFLAESAERLAKRYCVFSKGFAQVGIKCLESNAGLFLWMDLRPLLKNQTFEAEMALWRVIVDQVKINISPGSSFHCSEPGWFRVCYANMDDMAVEVSLMRMRGFVLQYKEVMMSENKKPCTLRNLSFSSRRFEDLLISPHSPLVKATI*	483

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev05g0997	482	SUPERFAMILY	PLP-dependent transferases	25	439	IPR015424	-
	Aev05g0997	482	PANTHER	1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 6	5	449	-	-
	Aev05g0997	482	ProSitePatterns	Aminotransferases class-I pyridoxal-phosphate attachment site.	280	293	IPR004838	GO:0003824\|GO:0009058\|GO:0030170
	Aev05g0997	482	CDD	AAT_like	89	422	-	-
	Aev05g0997	482	Pfam	Aminotransferase class I and II	49	429	IPR004839	GO:0009058\|GO:0030170
	Aev05g0997	482	Gene3D	-	71	329	IPR015421	GO:0003824
	Aev05g0997	482	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	84	100	-	-
	Aev05g0997	482	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	274	298	-	-
	Aev05g0997	482	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	306	329	-	-
	Aev05g0997	482	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	51	77	-	-
	Aev05g0997	482	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	197	221	-	-
	Aev05g0997	482	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	143	164	-	-
	Aev05g0997	482	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	121	141	-	-
	Aev05g0997	482	PRINTS	1-aminocyclopropane-1-carboxylate synthase signature	233	256	-	-
	Aev05g0997	482	PANTHER	BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED	5	449	-	-
	Aev05g0997	482	Gene3D	Aspartate Aminotransferase, domain 1	37	434	IPR015422	GO:0003824

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev05g0997	Aev-Chr5	7008938	7010926	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev05g0997	K20772		-	gmx:547976	749.969

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev05g0997	05	7008938	7010926	Aev03g3100	03	29705483	29707528	PCT