Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3100 ATGGCAGCGATGATGATGAAGGTGGAGCAAAGTGAATTGTTGTCTAAGATAGCGAGGGGCAATGGTCATGGTGAAGACTCGCCTTACTTTGATGGATGGAAGGCTTACGATGAAAACCCTTATCATCCCACTCACAACCCTGATGGGGTTATCCAAATGGGTCTTGCAGAGAATCAGCTTTCTGCTGATTTGGTTCAAGATTGGGTAGTGAACAACCCGGAGGCCTCCATTTGCACACCAGAAGGAGTACACGATTTCAGGGCCATAGCTAACTTTCAGGATTATCATGGTCTCCCTGAGTTCAGAAATGCTGTGGCTAAATTCATGGGGAGAACAAGAGGAAACAGAATAAGGTTTGACCCGGACCGTATTGTGATGAGCGGTGGAGCAACAGGAGCACACGAGGCCACCGTTTTCTGTTTGGCAGACCCCGGCGATGCCTTTTTGGTCCCTACTCCCTATTATGCTGCTTTTGATCGGGATTTGAGGTGGAGAACAGGAGCAGAACTGGTTCCAGTGATATGTGAAAGCTCCAACAATTTCAAGCTAACAAGGGAAGCATTAGAAGCTGCTTATGAAAAAGCCCGAGAAGCCAACACAAGGGTCAAGGGCTTGCTTATCACCAACCCATCAAACCCATTAGGCACAACCATGGACAGAGCAACCCTGCGATCCGTCGTGAGCTTCATCAACGAAAAGCGCATCCACCTTGTCTGCGACGAGATATACGCCGCCACCGTTTTCAGCCACCCCACCTTCATAAGCATTGCGGAGATTCTGGAAGAAGACAAGGACCTAGAATGTGACCGCGACCTCATTCACATCGTCTATAGTCTTTCAAAGGACATGGGCTTCCCTGGATTCAGGGTTGGCATCATATACTCATACAATGATGCTGTCGTGAAATGCGCTCGCAGGATGTCTAGCTTTGGATTGGTATCGTCCCAGACACAGCACCTCTTGGCATCGATGCTGAACGATGATGAGTTTGTGACGAGGTTTCTGGCAGAGAGTGGGAAGAGGTTGGGGCAGAGGTACAGAGTCTTCACCAGAGGATTAGCACAAGTTGGCATAAAGTGTTTGCCTAGTAATGGGGGCTTGTTCTTATGGATGGATCTTCGGCGGCTGCTGAAAAAGGCGACGTTTGATGATGAAATGGAGCTGTGGAGAGTGATCATTCATCAAGTGAAGATCAATGTGTCGCCTGGGTCTTCATTCCACTGCTCTGAGCCAGGGTGGTTCAGAGTGTGCTATGCTAACATGGATGATGCGGCTGTACAAGTTTCTCTGCAGAGGATTCGAAGCTTTGTGCTTCAGAATAAGGAGGTGAATAATGCAGTGTCTGATAAGAAGCGTTGCTGGCAGAGTAATTTGAGGCTCAGTTTCAAGACCAGAAGGTTTGATGACATCATGATGTCACCTCATTCTCCTATTCCTCATTCACCGCTCGTTCATGCCACCAATTAA 1467 0.4819 MAAMMMKVEQSELLSKIARGNGHGEDSPYFDGWKAYDENPYHPTHNPDGVIQMGLAENQLSADLVQDWVVNNPEASICTPEGVHDFRAIANFQDYHGLPEFRNAVAKFMGRTRGNRIRFDPDRIVMSGGATGAHEATVFCLADPGDAFLVPTPYYAAFDRDLRWRTGAELVPVICESSNNFKLTREALEAAYEKAREANTRVKGLLITNPSNPLGTTMDRATLRSVVSFINEKRIHLVCDEIYAATVFSHPTFISIAEILEEDKDLECDRDLIHIVYSLSKDMGFPGFRVGIIYSYNDAVVKCARRMSSFGLVSSQTQHLLASMLNDDEFVTRFLAESGKRLGQRYRVFTRGLAQVGIKCLPSNGGLFLWMDLRRLLKKATFDDEMELWRVIIHQVKINVSPGSSFHCSEPGWFRVCYANMDDAAVQVSLQRIRSFVLQNKEVNNAVSDKKRCWQSNLRLSFKTRRFDDIMMSPHSPIPHSPLVHATN* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3100 488 Gene3D - 73 327 IPR015421 GO:0003824
Aev03g3100 488 CDD AAT_like 91 434 - -
Aev03g3100 488 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 53 79 - -
Aev03g3100 488 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 235 258 - -
Aev03g3100 488 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 145 166 - -
Aev03g3100 488 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 304 327 - -
Aev03g3100 488 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 272 296 - -
Aev03g3100 488 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 86 102 - -
Aev03g3100 488 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 199 223 - -
Aev03g3100 488 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 123 143 - -
Aev03g3100 488 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 6 448 - -
Aev03g3100 488 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 6 6 448 - -
Aev03g3100 488 Coils Coil 178 198 - -
Aev03g3100 488 Gene3D Aspartate Aminotransferase, domain 1 39 432 IPR015422 GO:0003824
Aev03g3100 488 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 278 291 IPR004838 GO:0003824|GO:0009058|GO:0030170
Aev03g3100 488 SUPERFAMILY PLP-dependent transferases 23 437 IPR015424 -
Aev03g3100 488 Pfam Aminotransferase class I and II 51 433 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3100 Aev-Chr3 29705483 29707528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3100 K20772 - gmx:100037458 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3100 03 29705483 29707528 Aev03g3100 03 29705483 29707528 ECH
Aev05g0997 05 7008938 7010926 Aev03g3100 03 29705483 29707528 PCT