Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0973 ATGGTGAATCGACGCTTCTCTCAGGTGGCCACCAGCGATGACGACGACGACGATGACCATATTCCCCTTCAACAACATTTGAAGCTTCGAAAGAGGAAGAAGATGAGGCTTCTAGAAGAAGAAGAAGAGGAAGAACATAATCACGACATTGACAATGACGGCCAGCAAAAGCCGCATGAGGAGGAGGACGACGAGGAGGAGGAGGAGGAAGCGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGACACGAAGGGCAAGGAAGTGGTCGTGGAGGAAGTGCCTCAGGAGGACGCTAAGCCCATCGGCGATCCCATTAGGGTTTCTGGAAAGGGAAGAAGCAGAAGGAGGCATTACCCATCTTTCGAATTCGATGGCAGTCAATATACACTCGAGGATCCTGTGCTTCTAGTGCCCTTTGAAAATGACCAAAAGCCCTATGTCGCAATTATTAAGGACATCACACAGTCTTGCAATGGCAACATGATGATGACAGGGCAGTGGTTTTACCGCCCTGAAGAAGCTGAAAGACAAGGCGGCGGAAGCTGGCAGTCAAAGGATACTAGGGAGCTGTTTTACAGTTTCCACCGTGATGAGGTTCCTGCTGAGTCTGTCATGCATAAGTGTGTGGTGCATTTTGTTCCAGTGCACAAACAGCTTCCGAAACGTAAGGAGCATCCAGGGTTTATTGTGCAAAAGGTGTATGATACTGTTGAAAAGAAACTCTGGATGCTAACCGATAAGGACTATGAGGATGTTAAACAGCAAGAAATTGATGAGCTTGTTCAGAAAACTCTACAGCATATTGGTGAACTAGTTGACATCGAGACTGTAGAAGCCCCTCCAGATCAGGAAGATCTGACAAAAAATAAAAGGACAAAGAGAACATCACCTCGTGATGCTTTAAGGGAAGATGAAGGCACTCCTAAGAGTGACCAGCACCTGAAAGCTGATACACTTGGGAATGGTGTAAATGATGCCTCGGAGTATTACCACATATTAGTGAATTTCAATGTACTAACTGGTAACGCCCATCGTGACAAATGGTTGGAGAAGTTGCTTGAACACATTCATTACATGTGTAAGTCTGATGATGGTGTTGAAAAGGATGACAATATATTACGAAATGGGGATTCTGATGAATATAACAATAAATGTCCAGAATCTGCAAATGACTGTCAAGAAAAGGGCCAGAAGAGTTCCAAGTCTTTCAGCTGGCCAAGTGCTGCTGTTCCAGCCGTAGTTGCACTTGAAAAAGCATCACATGATGCTCTTTCATCGGATTTTCAGAAGTATAACAAAAAGCTGAGGCAGTTAGATTATAATCTCAAGAAAAATGCATTGCTAGCACGTCGTCTATTAAATGGAGAGCTGGAACCTTCAAAAATATTAAATATGACGCCTAATGAATTGAAGGAGGCTTTGACTGCTGAGGAAATGGAAAAGAAAGAATCTGATGAGTCACAGCTCATGCAGATGACAAATGCCCGCTGCAAAAGATGCAGTGAGCTTAAGGTGGGCTTGAGGGATATTATCCATGCCGGACGAGGTGACCGATATCAGCTGGCATGTATTGGTTGTGGTAATTCCTGGTTTGCCTCCAGCGATGAGGTGTCTATTCTCACAGTAGATGCATCAGCTTCAAAGAAAAACTTGCACACAGAACCATCGACCACTGAAAAAGTTGGAGATGTTGAGAAGAAGCTAGCAAGCTCCGGTGAGCCTGAAAAGCCAGCACATGACATCAACAAAACAAGTGAAGCATAA 1770 0.4441 MVNRRFSQVATSDDDDDDDHIPLQQHLKLRKRKKMRLLEEEEEEEHNHDIDNDGQQKPHEEEDDEEEEEEAKKKKKKKKKKKEDTKGKEVVVEEVPQEDAKPIGDPIRVSGKGRSRRRHYPSFEFDGSQYTLEDPVLLVPFENDQKPYVAIIKDITQSCNGNMMMTGQWFYRPEEAERQGGGSWQSKDTRELFYSFHRDEVPAESVMHKCVVHFVPVHKQLPKRKEHPGFIVQKVYDTVEKKLWMLTDKDYEDVKQQEIDELVQKTLQHIGELVDIETVEAPPDQEDLTKNKRTKRTSPRDALREDEGTPKSDQHLKADTLGNGVNDASEYYHILVNFNVLTGNAHRDKWLEKLLEHIHYMCKSDDGVEKDDNILRNGDSDEYNNKCPESANDCQEKGQKSSKSFSWPSAAVPAVVALEKASHDALSSDFQKYNKKLRQLDYNLKKNALLARRLLNGELEPSKILNMTPNELKEALTAEEMEKKESDESQLMQMTNARCKRCSELKVGLRDIIHAGRGDRYQLACIGCGNSWFASSDEVSILTVDASASKKNLHTEPSTTEKVGDVEKKLASSGEPEKPAHDINKTSEA* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0973 589 Gene3D - 333 474 IPR036575 GO:0006351
Aev05g0973 589 CDD BAH_plant_3 110 256 - -
Aev05g0973 589 MobiDBLite consensus disorder prediction 548 589 - -
Aev05g0973 589 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 588 - -
Aev05g0973 589 Coils Coil 59 88 - -
Aev05g0973 589 MobiDBLite consensus disorder prediction 278 321 - -
Aev05g0973 589 MobiDBLite consensus disorder prediction 34 57 - -
Aev05g0973 589 Coils Coil 24 44 - -
Aev05g0973 589 MobiDBLite consensus disorder prediction 1 92 - -
Aev05g0973 589 SMART BAH_4 128 247 IPR001025 GO:0003682
Aev05g0973 589 Gene3D - 30 230 IPR043151 -
Aev05g0973 589 Pfam BAH domain 130 243 IPR001025 GO:0003682
Aev05g0973 589 SUPERFAMILY Elongation factor TFIIS domain 2 341 473 IPR036575 GO:0006351
Aev05g0973 589 MobiDBLite consensus disorder prediction 369 403 - -
Aev05g0973 589 SMART mid_6 381 482 IPR003618 GO:0006351
Aev05g0973 589 MobiDBLite consensus disorder prediction 283 314 - -
Aev05g0973 589 Pfam Transcription factor S-II (TFIIS), central domain 342 488 IPR003618 GO:0006351
Aev05g0973 589 MobiDBLite consensus disorder prediction 369 383 - -
Aev05g0973 589 ProSiteProfiles TFIIS central domain profile. 346 500 IPR003618 GO:0006351
Aev05g0973 589 MobiDBLite consensus disorder prediction 555 589 - -
Aev05g0973 589 MobiDBLite consensus disorder prediction 384 403 - -
Aev05g0973 589 ProSiteProfiles BAH domain profile. 128 247 IPR001025 GO:0003682
Aev05g0973 589 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0973 Aev-Chr5 6843349 6846335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0973 - - cam:101495294 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0973 05 6843349 6846335 Aev05g0973 05 6843349 6846335 ECH
Aev05g0973 05 6843349 6846335 Aev03g3067 03 29469012 29473154 PCT