Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3067 ATGGGGAATCGAAGGTTCACTCAGGTTGCTACCAGTGACGATGAAGAAGACGAAGCACCCCTTCGTCCCAAGCAGCAGCAGCAGCAGCAGCAGCAGCATCAATCTTCTTCGCCGTCGAAGCAGCAACGTAAGAGGAAGCGCATGAAGCTCCAGGACGAGGACGAAGACGATGAAGAGGAGCAGCAGCTGCAGCAGCTGGAGGAGGAGGAGGAAGAAGAGGAGGATGAGGAGGAGGACCGGAAGAGGAGGAGGAAGAAGCAGAAGAAGAAGTCTAAGGAGAAGCAGGAAGAGGAAAGGTCCACCGAGGAAGAGGAATCCCCTCAGGAGGACGCTAAGCCCATTGGCGACCCCGTTAGGGTTTCCGGCAAAGCAAGAGGTAGAAGGAAGCATTACGAGTCCTTCGAGTTCGATGGAAACCAATATACCCTGGAGGACCCTGTACTTCTCGTGCCTGAGGATAAGGACCAAAAGCCGTATGTGGCGATTATTAAGGACATTACGCAGTCCGTAAATGGTAGCATGATGGTTACAGGGCAGTGGTTTTACCGTCCTGAAGAAGCAGAAAGAAAAGGTGGTGGCAGCTGGCAATCACGTGATACAAGGGAGCTCTTTTATAGTTTCCATCGTGATGAGGTTCCTGCAGAATCTGTTATGCATAAGTGTGTGGTCCACTTTGTTCCCATTCACAAACAGCTTCCAAATCGTAAGCAGCATCCTGGATTTATTGTGCAAAAGGTATATGATACGGTAGAAAAGAAATTATGGAAACTAACTGATAAGGACTATGAAGACAATAAACAACAAGAAATTGATGAGCTTGTCCAGAAAACTCTTAAACGGTTGGGCGAGTTTCTTGACATAGAGACCGATGAAGCTCCTGTTGATCAGGAAGATGTGATAAAGAGTAAAAGAATCTTAAGGAAAAAATGCATTTCGCCTCTTGATGTTTCTAGGGAAGAGGAAACAAGTCGTAAGAGTGACCAACATCTGAAACCTGAAACACCAGGGAGTTGTGTAAGTAATGCCTCAGAATATTATCGTATATTAGTGGATTTTAATGTGCTAACAGGAGATACTCATCGTGACAAAGTTCTGGAGAAGTTGCTTCAAAGTGTTCAGTTCGTATTTAATTCTGATGACAACATGAAGAAGGAAGAAAAAGGAAATGAAAATTCTGATCCAATCAACAATGGAAGCAATAATAAAAGTTCAGAATCAGCAAATGAATGTCAAGACAAGGTTCGGAAGAGTTCCAAGTCCTTCGTCTGGCCGGATGTTGCTGTTCCAGCTGTAGTTGCTCTGGAAAAAGCTTCACATGATACTCTTTCATCAGATTATCAGAAGTATAACCAAAAGTTACGGCAATTAGTGTTTAATCTGAAGAACAACACATTGCTAGCACGCCGTCTATTAAATGGAGAGTTGGAACCTTCAACAATATTGAATATGACGCCCAATGAATTGAAGGAGGGTTTGACTGCTGATGAAATATCCAAGAAGGAACCTGATGAGTCGCAGCACATGCAGATGACTGATGCCCGCTGCTCAAGATGCAGAGAGTGTAAGGTGGGATTGAGGGACATTATCCATGCCGGACACGGTGACCGATATCAGCTGGAATGTATTGCCTGTGGCAACTCCTGGTATGCCTCCCGCGATGAGGCGAGTATGCTGACCATAGATTCATCAGATTCCAAAAAAAGTGTAGGCACAGCACCATGGGCCACTGCTAAATTTGAGAGTGTTGAGAAGAAGCTGGTGAGTCCTCGCAAATCCGACAAGCAGCCGGGAACTGACGCCTTTAAGAAAACAAGCGAAGCATATATGCCTGTCTTGGAGACCCAGAAATCATTTGGCAAGTCCAGGAAAGATGACAGCACTGAAGCTCCAAAACATGCTGACTGA 1905 0.4541 MGNRRFTQVATSDDEEDEAPLRPKQQQQQQQQHQSSSPSKQQRKRKRMKLQDEDEDDEEEQQLQQLEEEEEEEEDEEEDRKRRRKKQKKKSKEKQEEERSTEEEESPQEDAKPIGDPVRVSGKARGRRKHYESFEFDGNQYTLEDPVLLVPEDKDQKPYVAIIKDITQSVNGSMMVTGQWFYRPEEAERKGGGSWQSRDTRELFYSFHRDEVPAESVMHKCVVHFVPIHKQLPNRKQHPGFIVQKVYDTVEKKLWKLTDKDYEDNKQQEIDELVQKTLKRLGEFLDIETDEAPVDQEDVIKSKRILRKKCISPLDVSREEETSRKSDQHLKPETPGSCVSNASEYYRILVDFNVLTGDTHRDKVLEKLLQSVQFVFNSDDNMKKEEKGNENSDPINNGSNNKSSESANECQDKVRKSSKSFVWPDVAVPAVVALEKASHDTLSSDYQKYNQKLRQLVFNLKNNTLLARRLLNGELEPSTILNMTPNELKEGLTADEISKKEPDESQHMQMTDARCSRCRECKVGLRDIIHAGHGDRYQLECIACGNSWYASRDEASMLTIDSSDSKKSVGTAPWATAKFESVEKKLVSPRKSDKQPGTDAFKKTSEAYMPVLETQKSFGKSRKDDSTEAPKHAD* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3067 634 MobiDBLite consensus disorder prediction 392 407 - -
Aev03g3067 634 MobiDBLite consensus disorder prediction 585 600 - -
Aev03g3067 634 MobiDBLite consensus disorder prediction 316 336 - -
Aev03g3067 634 Pfam Transcription factor S-II (TFIIS), central domain 356 507 IPR003618 GO:0006351
Aev03g3067 634 Gene3D - 347 490 IPR036575 GO:0006351
Aev03g3067 634 Gene3D - 56 247 IPR043151 -
Aev03g3067 634 MobiDBLite consensus disorder prediction 617 634 - -
Aev03g3067 634 MobiDBLite consensus disorder prediction 585 634 - -
Aev03g3067 634 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 72 630 - -
Aev03g3067 634 MobiDBLite consensus disorder prediction 316 331 - -
Aev03g3067 634 MobiDBLite consensus disorder prediction 91 112 - -
Aev03g3067 634 SMART BAH_4 139 258 IPR001025 GO:0003682
Aev03g3067 634 MobiDBLite consensus disorder prediction 380 411 - -
Aev03g3067 634 SMART mid_6 393 498 IPR003618 GO:0006351
Aev03g3067 634 MobiDBLite consensus disorder prediction 53 76 - -
Aev03g3067 634 ProSiteProfiles TFIIS central domain profile. 360 516 IPR003618 GO:0006351
Aev03g3067 634 Pfam BAH domain 140 256 IPR001025 GO:0003682
Aev03g3067 634 ProSiteProfiles BAH domain profile. 139 258 IPR001025 GO:0003682
Aev03g3067 634 MobiDBLite consensus disorder prediction 1 127 - -
Aev03g3067 634 Coils Coil 49 105 - -
Aev03g3067 634 MobiDBLite consensus disorder prediction 23 38 - -
Aev03g3067 634 CDD BAH_plant_3 121 267 - -
Aev03g3067 634 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 72 630 - -
Aev03g3067 634 SUPERFAMILY Elongation factor TFIIS domain 2 356 489 IPR036575 GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3067 Aev-Chr3 29469012 29473154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3067 - - aip:107630794 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3067 03 29469012 29473154 Aev03g3067 03 29469012 29473154 ECH
Aev05g0973 05 6843349 6846335 Aev03g3067 03 29469012 29473154 PCT