Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0960 ATGGGGAAAACCCAACACGAAGAGTCTGAAGCAACTGATAAACAGATCAGCAGTAACACAAAATGCGAATCTAATCAGATTGTACAGCAAACAAATGAACGCCCTGAATGGCTACCTGAAGGCTGGAGTGTGGATTTCAGAACTCGAAAAAGTGGTCCACATATGGGATCTGGATATAAGTGTTACATTAACCCACTTGGAAAGAAATTCTACTCCAAACTAGAAGTGTTTCGGTATCTTGAATCTATAAAGGGCAACAGCTGCGCTTCCAAGATGGAGGAGGACTGCAATACCATGCATTCTCCAAGCAATGATGTGGGTGAGAAGTCCAAGATTAAGAAGTCCACAGCTGAGAAGTCCAAGATTAAGAAGTCCACAGCTGAGAAGTCCAAGATTGACAAGTCTACAGCTGAGAAGTCTAAGATTGACAAGTCTACAGCTGAGAAGTCCAAGATTGAGAAGTCCACAGCTGAGAAATCCACGATTGGGAAGTCCACGGCTGAGAAGCCCTCAGCTGATAAGTCCACAGATGAAGATTTACCTCCTGGCTGGATAAAAGAAGTCAACATTAGGAAGAGTGGCAATAGCAATAAGAAAGATTTGTTCTATACAGATCCAGTAAGTGGCTATGTATTCCGTTCCAAGAAGGATGCACTGCGCTATATTGAGTCTGGAGATATTAATTCATGTGCGATTAAACCAAATAAAAGACAAATCCAGGATGAAGACAAATTAGCTCCAACATCAGCAGGCAAAAAGCAGAAACAAAAGCAGTCTGCTATTAAGCGACAACTTTTTGTTGGTGAATCTAGCTTGCTAGAGAATGGAGTAGCAAACCCTCCCAAGATGCAGAAAACATCTGATCAAGATGCTGTTCAAGAGAATCGCAGTAACACTAGTCTATCCAAAAAGAAGGAGTTGGCTCACCGGTCTTCACAGAGACTTGCTGGGTTAGAACCTGACCAGTCGACTAACAACCTGACCAATGAACAGACTCTTCCAGTCCCAAAAAGAAACCTGAGGAGAGGTAGAACTGCTTTAGATAGTGACTTAGCAAATAAATCGTCTCATCAGCTCAATGGTGTCCCAGAAACAGCGAAAGTTGAAGACAATAAGCCAGATAATCCTCATAATACTCAGGGCTTGGCCTCTAAGGGCCGTGTTTTGAACGAAAAGAAATTGCTCACAAGTGAGGTTGGAAAAAGTGGAGAAATAAGTTCCAACTCAAACAAATCCAGCAACAAGAAAGGGCATCAGTTTCCTTGCCGGTCATCAAAAAGACTGGCTGGAGTTGAAGCTAAGCTAACGAGTAACTCACTCTCCTATGAAAGAGCTCCTGAATATCAGAGCAAAAAGTCCAAGGGTAAGGTCAATGCAGACTTGCATCATTCAGCAGTGGAGTTTGTAGAACCTGCATCAACAAATGGAGAGTCATCAAACAAAAGCAGAAAACCCTCTAGAATCCCACCTGTAAACAATGGTCAACTGGAGAAGCATGAAAGTGAAAATATGGATGGTGAGACATCAGAACCTCAGCAATCTTTTGCATTCCACTATTCTTGGTCTGACCCAAGCTTGGAATTTGCAATTAACACCCTCACCGGTTCATTACCAGCTGAGGATTCAGTTGTTAAAAGTCCCGCTGTGATTTCTAAGATTGATAAGTTTCCTGAAAACAGTTTGTCTGAGAATGTCACAACAGGAAGCAGCAAAGATAAAAAGCCGAAGGTAAATTCAAGTAAATCCAAGAACAAGAAAGAGCTTAAACCGCCTACAAGGCTGTCCAAACGACTTGCTGGCCATGTACCTGATGTACTGCCTGCTGAAAGAGCTCTTGAATATTCCACTAGAAAATCATGCAAGGATAAATCAAATGCAAATGCAATTTTAACTAATGGAGAGTCTGAACATCTTCATGCAGAAGAATCCAAGCTCACTGTTCCTGCATCTGACAAGTTGAAAACCAATGAATCTGGTGAATTATCAAATGGTGAGAAGCCATATGATGCAGAAACTGTTCCCAATGAAAAAGTGCATAAGCTTCAAGCTGAAATTACTAATGATGAGAAATCAGGGTCACAGCTCCCCTTACAGTTTGGGGACTCCTGGTCAGATCCATGCGTAGAATTTGCAATTAAGACTCTGACTGGCGCTTTGCCAGTTGATGCTGCTGATGCTGTCAATATGCCTGTTGTTACACCTGATGCTAATGACCTGCCAAATAAGGAAGTGCTTGAGAATGTGGTGCAGAAGAGCGATGAAGCTGCTCATGATAACTCCAACCATTGCCAGGCTAAGGAAGAGTTTGATACAGTTTGCCAGCCATCCAAACAACTCCTAGACCAACCTGATTTGAACGTCAGCTCCACATCCTATGAAAATGATCCTAAATTTGTGACTCAAGAGTCTGCCAGTGTTGAAGGCAATATAACCATGAATTTGGATGGAGGAGAATCCCTACATAGTGGAGGTAGGATTATGACACAAATAGATATTAACACACTATTTTTCGATGACCCATTCATGGAAGATGAACAGCTTCTTGGGGGTGAATCTATTGATGAACAACCACAGCCTGAAACTGAAACCACAAACCAAGATAATTCTGAAAGAGAATTTTGTGCTTCATTTATGGATTCTTGGTCAGACCCATGCTTAGAATTTGCATTCAAGACTTTAACCGGAGCATTACCGGTAGAGGAAAATATAGGAATGCAAAGATGTTTCCAAGAACCTGCTAATAATCATGAGAAGAGAGATGGGAGCTCAACATTGCCAGAAATTGGATCTTCCAGCATTTCCAAGACTCAGAGCGATAATGAGGAGAAATCAATGCCAGGGCAGCAGGTATCGATTCCGAGCTCGAACGGTTGCAGTAGGGTTGATACTCAAAATCACTATTCTCAGTGGAATAATGATAATTTTCAAAGAAAGTGA 2937 0.4188 MGKTQHEESEATDKQISSNTKCESNQIVQQTNERPEWLPEGWSVDFRTRKSGPHMGSGYKCYINPLGKKFYSKLEVFRYLESIKGNSCASKMEEDCNTMHSPSNDVGEKSKIKKSTAEKSKIKKSTAEKSKIDKSTAEKSKIDKSTAEKSKIEKSTAEKSTIGKSTAEKPSADKSTDEDLPPGWIKEVNIRKSGNSNKKDLFYTDPVSGYVFRSKKDALRYIESGDINSCAIKPNKRQIQDEDKLAPTSAGKKQKQKQSAIKRQLFVGESSLLENGVANPPKMQKTSDQDAVQENRSNTSLSKKKELAHRSSQRLAGLEPDQSTNNLTNEQTLPVPKRNLRRGRTALDSDLANKSSHQLNGVPETAKVEDNKPDNPHNTQGLASKGRVLNEKKLLTSEVGKSGEISSNSNKSSNKKGHQFPCRSSKRLAGVEAKLTSNSLSYERAPEYQSKKSKGKVNADLHHSAVEFVEPASTNGESSNKSRKPSRIPPVNNGQLEKHESENMDGETSEPQQSFAFHYSWSDPSLEFAINTLTGSLPAEDSVVKSPAVISKIDKFPENSLSENVTTGSSKDKKPKVNSSKSKNKKELKPPTRLSKRLAGHVPDVLPAERALEYSTRKSCKDKSNANAILTNGESEHLHAEESKLTVPASDKLKTNESGELSNGEKPYDAETVPNEKVHKLQAEITNDEKSGSQLPLQFGDSWSDPCVEFAIKTLTGALPVDAADAVNMPVVTPDANDLPNKEVLENVVQKSDEAAHDNSNHCQAKEEFDTVCQPSKQLLDQPDLNVSSTSYENDPKFVTQESASVEGNITMNLDGGESLHSGGRIMTQIDINTLFFDDPFMEDEQLLGGESIDEQPQPETETTNQDNSEREFCASFMDSWSDPCLEFAFKTLTGALPVEENIGMQRCFQEPANNHEKRDGSSTLPEIGSSSISKTQSDNEEKSMPGQQVSIPSSNGCSRVDTQNHYSQWNNDNFQRK* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0960 978 MobiDBLite consensus disorder prediction 280 298 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 574 594 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 170 185 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 431 446 - -
Aev05g0960 978 PANTHER OS04G0193200 PROTEIN 543 969 - -
Aev05g0960 978 PANTHER OS04G0193200 PROTEIN 5 567 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 912 978 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 225 516 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 1 41 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 557 573 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 447 463 - -
Aev05g0960 978 SUPERFAMILY DNA-binding domain 33 88 IPR016177 GO:0003677
Aev05g0960 978 MobiDBLite consensus disorder prediction 551 602 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 400 419 - -
Aev05g0960 978 Gene3D - 144 265 - -
Aev05g0960 978 Gene3D - 1 143 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 15 33 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 633 670 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 93 203 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 106 158 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 924 978 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 251 265 - -
Aev05g0960 978 Pfam Methyl-CpG binding domain 30 84 IPR001739 GO:0003677
Aev05g0960 978 Pfam Methyl-CpG binding domain 175 225 IPR001739 GO:0003677
Aev05g0960 978 SUPERFAMILY DNA-binding domain 176 231 IPR016177 GO:0003677
Aev05g0960 978 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 28 101 IPR001739 GO:0003677
Aev05g0960 978 MobiDBLite consensus disorder prediction 316 335 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 471 489 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 236 250 - -
Aev05g0960 978 MobiDBLite consensus disorder prediction 850 869 - -
Aev05g0960 978 PANTHER OS04G0193200 PROTEIN 543 969 IPR038945 -
Aev05g0960 978 PANTHER OS04G0193200 PROTEIN 5 567 IPR038945 -
Aev05g0960 978 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 170 244 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0960 Aev-Chr5 6767477 6772579 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0960 - - aip:107643060 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0960 05 6767477 6772579 Aev05g0960 05 6767477 6772579 ECH
Aev05g0960 05 6767477 6772579 Aev03g3044 03 29339720 29345356 PCT