Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3044 ATGAACACCTTTACTCTTTCTTTGTTGTTGTTGTTGTTGTCGGTTGTTGACGATGATATTGTTACTATTGACTTGTTTGGGAAACGGTATGTGGAGGAAAAGCAGTCCAGAATTACTTTTGTGACCTTAATTGCACGGGTCAGTGTCAAGGCTGTTAAGGTGTTTGATTGTGTGGTGGTAACTGTGATTCCCGGACAGACACATGAACTTCTTGTTTTGAAGTCTGAAGAAGCCAGTACACAGATCAACATTAACACAGAATGCATTTCTAAACAAGAAATTCAGATTGTAGAGAAAACTAATGAACACCCTGGATGGTTACCTGATGGGTGGACCGTGGATGTCAAAACTCGAAGAAGTGGTGTGCTTAGAGGATCTGGATATAAGTGTTACATTGATCCATTGAAGGGATACAAGTTCTACTCCAAACCAGAGGTATTACGATATCTTGATATTATAAAGGACAACAGCTGCACTCCCAAGAAGCCCAAGAGGGAGAACAGATGCACTCTGAAGAAGGAAAAAAATGAGAATAGCTGCACTCCAAAAGAGGATAAAAAGGAAAACAGCTACACTCCAAAAGAGGAGAAAAAGGAGAACAGCTGCACTCCCAAAGAGGAGAAAAGGGAAAACAGCTGCACTCTCAAAGAGGAGAAAGAGGAAAATGGCTGCACTCCCAAAGATGAGAAAAAGGAGAATTACTGCACAACCATGGAGGAGAAAAAGGACGACAACTGCACCCCCAAGAAGGAAAAGAAATGTTCTAACATAGAGTCTCCAAGCAACGTTGTGATTGAGAAGTCAGCTGCAGAGGGTTTTCCACCAGGATGGTTAAAAGTAGTAAGGATTAAAACAAATGCCAATGGCAGCATTAGGAAAGATCCGTTTTATAAAGATCCAGTGAGTGGATATGTATTCCGTTCGAAGAAGGAAGTACAGAGGTATCTTGAGTCTGGACATAAACCTAGGCGAAAACAAATCCAGGATGGAGACAAGCTAAGTGCATCCCGTGCTGCTAAAAGACAGAAACTGGATCAGTCTGTGCCAAAACAGGAGCCTTTCACAAGCAAAGAAATATTTGATAAAAACAGCTTAGACTTGTCAGATGCTGACAGCTCAAGGAAAGGGCAAGATGTGAACGTCCAATCCAAAATGACGGTTGCTTTTGTTCCCACAGGTGAATTTGTTGCGAAGATGCATTCACTAGAGGATGGAGCTGAAAACCTTTCTGAAATGAAGAAAATATCCAATCCAGATGATATGCCAGAGAAGGAGCATGCTGGAAATATGATGGAGAGTGCTAATGAAAAGAATCACAGTACCCCTAGCAAATCCAAAAAAGAGTTCAATGTGCATCACCGGTTTTCACCACGAATTGCTGGAATTGAACCTTTCCAGTTGGCCGACAATGTGACAAATGAGCAGAATCCTCAAGTTCCAAAAAGAAACATGAGGAAAAATAGAACGACACTAGATGTTGATTTAGAAAATAACTCATCTAATCACGTCAACGGTGTCCCAGAAACTGAGCATACATATAAAATGCAACAAGGGGTGATCAACACAATCAACAATCTTTTTGAAGACCAAGTTGTTGCCGAAGAGAAACCAAATAAGCTAGAAACAGATAAAATAGGTGACAAGAAGCCAGAAATGCATAAAACCTCCAAGAAATCCAATAACAAGAGGGACCACCATATTCCTCGTCGGACTTCAAAACGGCTTGCTGGATTTGATCATGAGCCGATGAACAACTCCATATCCTATGAAAAGACTCCTGAATATGAAAGCAAAAGGTCTAAAGATGACATCAATGCAGAGTTGCATCAAAGTGAGGGTGGGTCAACTATAGAGCTTGCTAATCATGCACCAGTAAATGAAGAGTCACCAAACAAAAGACACAAATCTTCTAAAATCCCACCCATTTCAGATGGTGAACTGGAGAACCTTCAAGCTGAAAAAATTGGTGATGAGAAATCAGAACCTCAGATTTCATTTGCATTCCACTACTCTTGGTCCGACCCAAGTTTGGAATATGCAGTTAATACCCCGACAAGTGTGTTACCAGTTGAGGATTCAGTTTATACTGGACCCACCACAGTCCCCCAAACTGATATTGAAAATAAGTTGTTTGTCAATGTTACAGGAAGAAGCAGAGACAGAAATGACCCACAGGTACGTACAAATAAATCCAAGAAGAAAAAAGAGCTCAAAGTGCCTATGCGGGTATCTAAACGACTTGCTGGCCTTGAACCTGATGTTCTGCCTTCTGAAAGAGCTGTTGAATATGCCTATAAAAAGACATGTAAAGGACAACCAACTGCAACCGTAATTGCAGCTGAAATTTTAACAAATGGGGCACCTGACCATCTTGGCATAGTGGAAGAAACCAAGCTTACGTGCCATGCATCTCACCGTTCGAAAACAGAAGTACCAGGGGAATCATCAAACAAGAGTGACAAGTCATATGATGCTGAAACTGTACCCACAGAACAATTGCAGAAAGTTGTAGCTGAAAATATTGGTGATGAGAGATCAGAGCCACAGCTTCCTGAGCAATATAGGGAGTCCTGGTCAGATCCTTGCCTAGAATATGCATTCAATACTCTCACTGGTGGTTTGCCATTTGATGCTGCCACAGACATTTTTCCTGTCATGACTCCGGATGTTAATTCCCTGCCAAATAAGGAATTTCATGGGTGTGTTGTGACAAGCATCAGTGAAGAAGCTCATAGTAACCCAAACCAACCTCAGAACAAGAAAGAACATGTTAACCAGCCTTTAGAACCACTCTCGTGGCAACCTGAGTTGAGGACTGGCTCCACATCTTGTGACAATGCTCCTAATTTTATTACCAGAGACACTTGCAGTGATGAAGGCTTTATTACAAGGACTTCAAATGGAGAGTCTACATGTGTGGATGTTGGAAATTTTACACATCTGATGCATCATTCTAGAGATATGAATACACTAATACACAAAGAGCCATTGAAGGAAAATGGACAGGTTCTTGATGGTGTTTCTGTGATAACGGAGCAACAACAACTTGAAACTGAAACTATAAACCATGATAATTCTGAATCACAGTTTTGCGCTTCGTTTATGAATTCTTGGTCTGATCCGTGTCTAGATTTTGCATTTAAGACTCTTACTGGTGTGATACCACTAGATGAAAATTTAGCATTTCAAGGATGTTTCCAGCAGCCTTCTAACTGTCATAACCATACAGATGGTAGTGGCCCAATGTTTCCAGATTTTGGACCTCCAGGATTTTCTCAAAATGATTTCCCATTCCACTATGATGTAGGGGTAAGTTCCTTTCCAGGGCAGCAGTCATCAATGGGCAATCCATTTCTACCCATGGAAAAAGCGAGCCTGCAAGGTCGTCCTGAAGTTCATCCTCAAAAGCAATACTCTCAGTGCAACAAGAATTTTCAAAGATAA 3444 0.4114 MNTFTLSLLLLLLSVVDDDIVTIDLFGKRYVEEKQSRITFVTLIARVSVKAVKVFDCVVVTVIPGQTHELLVLKSEEASTQININTECISKQEIQIVEKTNEHPGWLPDGWTVDVKTRRSGVLRGSGYKCYIDPLKGYKFYSKPEVLRYLDIIKDNSCTPKKPKRENRCTLKKEKNENSCTPKEDKKENSYTPKEEKKENSCTPKEEKRENSCTLKEEKEENGCTPKDEKKENYCTTMEEKKDDNCTPKKEKKCSNIESPSNVVIEKSAAEGFPPGWLKVVRIKTNANGSIRKDPFYKDPVSGYVFRSKKEVQRYLESGHKPRRKQIQDGDKLSASRAAKRQKLDQSVPKQEPFTSKEIFDKNSLDLSDADSSRKGQDVNVQSKMTVAFVPTGEFVAKMHSLEDGAENLSEMKKISNPDDMPEKEHAGNMMESANEKNHSTPSKSKKEFNVHHRFSPRIAGIEPFQLADNVTNEQNPQVPKRNMRKNRTTLDVDLENNSSNHVNGVPETEHTYKMQQGVINTINNLFEDQVVAEEKPNKLETDKIGDKKPEMHKTSKKSNNKRDHHIPRRTSKRLAGFDHEPMNNSISYEKTPEYESKRSKDDINAELHQSEGGSTIELANHAPVNEESPNKRHKSSKIPPISDGELENLQAEKIGDEKSEPQISFAFHYSWSDPSLEYAVNTPTSVLPVEDSVYTGPTTVPQTDIENKLFVNVTGRSRDRNDPQVRTNKSKKKKELKVPMRVSKRLAGLEPDVLPSERAVEYAYKKTCKGQPTATVIAAEILTNGAPDHLGIVEETKLTCHASHRSKTEVPGESSNKSDKSYDAETVPTEQLQKVVAENIGDERSEPQLPEQYRESWSDPCLEYAFNTLTGGLPFDAATDIFPVMTPDVNSLPNKEFHGCVVTSISEEAHSNPNQPQNKKEHVNQPLEPLSWQPELRTGSTSCDNAPNFITRDTCSDEGFITRTSNGESTCVDVGNFTHLMHHSRDMNTLIHKEPLKENGQVLDGVSVITEQQQLETETINHDNSESQFCASFMNSWSDPCLDFAFKTLTGVIPLDENLAFQGCFQQPSNCHNHTDGSGPMFPDFGPPGFSQNDFPFHYDVGVSSFPGQQSSMGNPFLPMEKASLQGRPEVHPQKQYSQCNKNFQR* 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3044 1147 MobiDBLite consensus disorder prediction 1132 1147 - -
Aev03g3044 1147 Pfam Methyl-CpG binding domain 98 164 IPR001739 GO:0003677
Aev03g3044 1147 Pfam Methyl-CpG binding domain 274 321 IPR001739 GO:0003677
Aev03g3044 1147 MobiDBLite consensus disorder prediction 534 646 - -
Aev03g3044 1147 SUPERFAMILY DNA-binding domain 102 158 IPR016177 GO:0003677
Aev03g3044 1147 MobiDBLite consensus disorder prediction 315 379 - -
Aev03g3044 1147 MobiDBLite consensus disorder prediction 315 347 - -
Aev03g3044 1147 PANTHER OS04G0193200 PROTEIN 77 552 IPR038945 -
Aev03g3044 1147 PANTHER OS04G0193200 PROTEIN 713 1141 IPR038945 -
Aev03g3044 1147 PANTHER OS04G0193200 PROTEIN 553 708 IPR038945 -
Aev03g3044 1147 MobiDBLite consensus disorder prediction 592 608 - -
Aev03g3044 1147 MobiDBLite consensus disorder prediction 802 825 - -
Aev03g3044 1147 CDD MBD 274 318 - -
Aev03g3044 1147 MobiDBLite consensus disorder prediction 534 558 - -
Aev03g3044 1147 MobiDBLite consensus disorder prediction 802 827 - -
Aev03g3044 1147 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 263 337 IPR001739 GO:0003677
Aev03g3044 1147 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 97 176 IPR001739 GO:0003677
Aev03g3044 1147 SUPERFAMILY DNA-binding domain 270 319 IPR016177 GO:0003677
Aev03g3044 1147 MobiDBLite consensus disorder prediction 1127 1147 - -
Aev03g3044 1147 Gene3D - 234 364 - -
Aev03g3044 1147 Gene3D - 89 179 - -
Aev03g3044 1147 PANTHER OS04G0193200 PROTEIN 77 552 - -
Aev03g3044 1147 PANTHER OS04G0193200 PROTEIN 713 1141 - -
Aev03g3044 1147 PANTHER OS04G0193200 PROTEIN 553 708 - -
Aev03g3044 1147 MobiDBLite consensus disorder prediction 177 203 - -
Aev03g3044 1147 MobiDBLite consensus disorder prediction 355 373 - -
Aev03g3044 1147 MobiDBLite consensus disorder prediction 627 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3044 Aev-Chr3 29339720 29345356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3044 - - gmx:100807457 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3044 03 29339720 29345356 Aev03g3044 03 29339720 29345356 ECH
Aev05g0960 05 6767477 6772579 Aev03g3044 03 29339720 29345356 PCT