Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0959 ATGGGTTCACTTCCCACTCTTCCACTAAGCACCCTGCTCATCCTCCTCTCCTCCTTCACAATAACCCAATCAGCAAATTTCGAGATCGTCAACAACTGCGCATACACAGTCTGGGCCGCAGCCAGTCCAGGCGGTGGTCGCCGCCTAGACCGCGGCCAAACATGGAACCTTTGGGTTGCACCCGGCACAGCCATGGCCCGTATATGGGGTCGCACCGGGTGCAACTTCGATGGCAGCGGTCGTGGGCGCTGCCAGACAGGTGACTGCACCGGTGGACTCCAATGCACAGGCTGGGGTGTCCCTCCAAACACCCTGGCCGAATTCGCATTGAACCAATATGGCAACCAAGATTTCTACGACATCTCTCTGGTGGACGGATTCAACATCCCCATGGACTTCTTCCCATTGAATGGCGGGTGTCACAAGATAAGTTGCACCGCCGATATCAACGGACAGTGCCCTAACGAGTTAAGGGCACAGGGTGGTTGTAACAACCCATGCACGGTGTTTAAGACCAATGAGTTTTGCTGCACGAATGGACAAGGGAGTTGTGGGCCCACTTACTTCTCAAGGTTCTTTAAGGATAGGTGCCGTGATGCGTATAGCTACCCTCAGGATGACCCAACCAGCACTTTCACGTGCCCTGCTGGCTCTAACTACAAGGTTGTGTTCTGTCCTTTGGGGCATGATCATGTTCAGCTTCAGATGCCTGGAGAAAGTAGTTACTAG 729 0.5391 MGSLPTLPLSTLLILLSSFTITQSANFEIVNNCAYTVWAAASPGGGRRLDRGQTWNLWVAPGTAMARIWGRTGCNFDGSGRGRCQTGDCTGGLQCTGWGVPPNTLAEFALNQYGNQDFYDISLVDGFNIPMDFFPLNGGCHKISCTADINGQCPNELRAQGGCNNPCTVFKTNEFCCTNGQGSCGPTYFSRFFKDRCRDAYSYPQDDPTSTFTCPAGSNYKVVFCPLGHDHVQLQMPGESSY* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0959 242 ProSiteProfiles Thaumatin family profile. 24 226 IPR001938 -
Aev05g0959 242 SUPERFAMILY Osmotin, thaumatin-like protein 26 226 IPR037176 -
Aev05g0959 242 PRINTS Pathogenesis-related protein signature 216 225 IPR001938 -
Aev05g0959 242 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Aev05g0959 242 PRINTS Pathogenesis-related protein signature 117 133 IPR001938 -
Aev05g0959 242 PRINTS Pathogenesis-related protein signature 45 54 IPR001938 -
Aev05g0959 242 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Aev05g0959 242 PRINTS Pathogenesis-related protein signature 80 109 IPR001938 -
Aev05g0959 242 PANTHER OS03G0233200 PROTEIN 11 226 IPR001938 -
Aev05g0959 242 PIRSF PR5 2 240 IPR001938 -
Aev05g0959 242 Pfam Thaumatin family 31 226 IPR001938 -
Aev05g0959 242 ProSitePatterns Thaumatin family signature. 80 95 IPR017949 -
Aev05g0959 242 Gene3D Thaumatin 24 227 IPR037176 -
Aev05g0959 242 PANTHER PATHOGENESIS-RELATED PROTEIN R MINOR FORM 11 226 - -
Aev05g0959 242 SMART tha2 27 226 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0959 Aev-Chr5 6764712 6765440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0959 9 241 Receptor kinase-like Gene Family AT5G38280 36.154 2.01e-44 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0959 - - gmx:100240704 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0959 05 6764712 6765440 Aev05g0959 05 6764712 6765440 ECH
Aev05g0959 05 6764712 6765440 Aev03g3042 03 29335687 29336352 PCT