Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3042 ATGACTCTCAGCATCACCACTCTCTTCTTCTTCTTATTCACCTCCTCTTCCTATGCAGCACACTTTGACATCATAAACCGATGCCCATACACCGTGTGGGCCGCAGCCGTCCCCGTCGGCGGTGGCACGCAACTAAACTCGGGCCAATCATGGCCCATTGAAGTCCCAGCGGGCACCAAAGCTGCCCGCATTTGGGCCCGAACCGGCTGTTCCTTTGACGGCTCGGGCCGCGGGAGGTGCACGACAGGGGACTGCGGCGGCCTGCTGAGGTGCCAAGCCTACGGCAGCCCACCCAACACGCTGGCGGAATTCGCGCTGAACCAATTCAACAACCTCGACTTCTTCGACATCTCACTGGTGGACGGGTTCAATGTTGCCATGGAGTTCAGCCCCACATCGAATGGGTGCACGCGCGGGATAAGGTGCACTGCAAATATCAACGGACAGTGCCCTAATGAGCTTAGGACCAATGGAGGCTGCAACAACCCTTGTACTGTCTACAAAACGGACCAGTATTGCTGCAATTCGGGAAACTGTGGGCCCACTCCGCTGTCCATGTTCTTCAAGCAGAGGTGTCCTGATGCTTATAGTTACCCAAAGGATGATCAAACAAGCACCTTTACTTGCAACGGAGGAACAAACTATAGGGTTGTCTTTTGCCCTTGA 666 0.5511 MTLSITTLFFFLFTSSSYAAHFDIINRCPYTVWAAAVPVGGGTQLNSGQSWPIEVPAGTKAARIWARTGCSFDGSGRGRCTTGDCGGLLRCQAYGSPPNTLAEFALNQFNNLDFFDISLVDGFNVAMEFSPTSNGCTRGIRCTANINGQCPNELRTNGGCNNPCTVYKTDQYCCNSGNCGPTPLSMFFKQRCPDAYSYPKDDQTSTFTCNGGTNYRVVFCP* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3042 221 Pfam Thaumatin family 26 221 IPR001938 -
Aev03g3042 221 PANTHER PROTEIN P21 5 221 - -
Aev03g3042 221 SUPERFAMILY Osmotin, thaumatin-like protein 20 221 IPR037176 -
Aev03g3042 221 Gene3D Thaumatin 20 221 IPR037176 -
Aev03g3042 221 ProSiteProfiles Thaumatin family profile. 19 221 IPR001938 -
Aev03g3042 221 ProSitePatterns Thaumatin family signature. 76 91 IPR017949 -
Aev03g3042 221 CDD TLP-P 22 221 - -
Aev03g3042 221 PIRSF PR5 1 221 IPR001938 -
Aev03g3042 221 PRINTS Pathogenesis-related protein signature 63 74 IPR001938 -
Aev03g3042 221 PRINTS Pathogenesis-related protein signature 211 220 IPR001938 -
Aev03g3042 221 PRINTS Pathogenesis-related protein signature 21 33 IPR001938 -
Aev03g3042 221 PRINTS Pathogenesis-related protein signature 41 50 IPR001938 -
Aev03g3042 221 PRINTS Pathogenesis-related protein signature 113 129 IPR001938 -
Aev03g3042 221 PRINTS Pathogenesis-related protein signature 76 105 IPR001938 -
Aev03g3042 221 PANTHER OS03G0233200 PROTEIN 5 221 IPR001938 -
Aev03g3042 221 SMART tha2 22 221 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3042 Aev-Chr3 29335687 29336352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3042 3 221 Receptor kinase-like Gene Family AT5G38280 35.081 1.82e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3042 - - gmx:100804547 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0959 05 6764712 6765440 Aev03g3042 03 29335687 29336352 PCT