Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0932 ATGGACAAATCAAGTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTTCGTCTTCAACATCGTGTTCTTCTCATCACGTGGAGCGCATGATAAACTCGAACCACTACAAGTCCCCTTCGAGAACAATCTGCTCCGACAGGTTCATACCATGCAGATCCACCTCCAAATTCTCTCTCTTAGACATTCCCACCGCCGATACTCCCTCATCACCTTACGCCTCTCTCCTTCGGACAGCGCTGTTCGGGCCCGATGCTCCCGTCACGCCGGAGAAGCCGATTCCCAATATATTCCGTTACAAGACGGAGACTCGCCAGTCCATGCACTCCCTCTCGCCCTTCGTGCTCGATCACGACATCGTTTCTTCCGTCAATCATACACCAGTTAAGCCTCCCAGGAAGATTCCGCGATCGCCATTTAAGGTTTTGGATGCACCTGCGCTTCAAGACGATTTTTATCTGAACCTTGTGGATTGGTCTCCGCTCAATGTCTTGGCTGTGGGTCTCGGGAACTGTGTTTATCTGTGGAATGCGTGTAGCAGCAAGGTAGTAAAACTATGTGATTTGGGGAGTGATGATTGCGTCTGTTCAGTTGGTTGGGCTCAGCGTGGTGCACTCCTTGCGGTTGGAACCAGCAGTGGTCAAGTCCAGATTTGGGATGCATCTCAATGCAAGACAATAAGAACTATGGAGGGTCATCGTTTACGAGTTGGGGCTTTGGCTTGGAGTTCATCTCTTTTATCTTCTGGTAGCCGTGATAAAAGTATTTATCAACGAGATATACGTGCACAGGATGATTTTGTCAGTAAACTGTCAGGCCACAAGTCAGAGGTTTGCGGGCTGAAGTGGTCTTTTGATAACCGGGAGTTAGCTTCTGGAGGAAATGACAACAAATTGCTTGTTTGGAATCAACACTCAACCCAGCCTATCCTGAAGTACTGTGAGCATACAGCAGCTGTTAAAGCTATTGCATGGTCTCCTCATGTTCATGGACTTCTTGCATCAGGGGGAGGAACTGCAGATCGATGCATTCGTTTCTGGAATACAACAACAAACTCGCACTTAAGCTGTTTGGACACTGGAAGTCAGGTTTGCAATCTCGTCTGGTCTAAAAATGTGAACGAACTAGTTAGCACACATGGCTACTCCCAGAACCAGATAATAGTTTGGAGATATCCCACCATGTCTAAGCTGACAACTCTTACAGGCCATACTCTTAGAGTTCTTTATCTTGCCATGTCTCCAGATGGGCAGACCATTGTCACCGGAGCTGGAGATGAAACACTCAGGTTTTGGAATATATTCCCTTCCCAAAATTCACAGAATACTGAGAGTGAAATTGGAGCATCGTCACTTGGAAGAACAACTATTAGGTGA 1377 0.4699 MDKSSASSSSSSSSSPPSSSTSCSSHHVERMINSNHYKSPSRTICSDRFIPCRSTSKFSLLDIPTADTPSSPYASLLRTALFGPDAPVTPEKPIPNIFRYKTETRQSMHSLSPFVLDHDIVSSVNHTPVKPPRKIPRSPFKVLDAPALQDDFYLNLVDWSPLNVLAVGLGNCVYLWNACSSKVVKLCDLGSDDCVCSVGWAQRGALLAVGTSSGQVQIWDASQCKTIRTMEGHRLRVGALAWSSSLLSSGSRDKSIYQRDIRAQDDFVSKLSGHKSEVCGLKWSFDNRELASGGNDNKLLVWNQHSTQPILKYCEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNSHLSCLDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLTTLTGHTLRVLYLAMSPDGQTIVTGAGDETLRFWNIFPSQNSQNTESEIGASSLGRTTIR* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0932 458 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 401 434 - -
Aev05g0932 458 ProSiteProfiles Trp-Asp (WD) repeats profile. 401 442 IPR001680 GO:0005515
Aev05g0932 458 SUPERFAMILY WD40 repeat-like 151 441 IPR036322 GO:0005515
Aev05g0932 458 SMART WD40_4 264 303 IPR001680 GO:0005515
Aev05g0932 458 SMART WD40_4 351 391 IPR001680 GO:0005515
Aev05g0932 458 SMART WD40_4 136 177 IPR001680 GO:0005515
Aev05g0932 458 SMART WD40_4 306 348 IPR001680 GO:0005515
Aev05g0932 458 SMART WD40_4 223 260 IPR001680 GO:0005515
Aev05g0932 458 SMART WD40_4 180 220 IPR001680 GO:0005515
Aev05g0932 458 SMART WD40_4 394 433 IPR001680 GO:0005515
Aev05g0932 458 Pfam Anaphase-promoting complex subunit 4 WD40 domain 182 244 IPR024977 -
Aev05g0932 458 ProSiteProfiles Trp-Asp (WD) repeats profile. 188 229 IPR001680 GO:0005515
Aev05g0932 458 ProSitePatterns Trp-Asp (WD) repeats signature. 420 434 IPR019775 -
Aev05g0932 458 Gene3D - 129 437 IPR015943 GO:0005515
Aev05g0932 458 ProSiteProfiles Trp-Asp (WD) repeats profile. 271 312 IPR001680 GO:0005515
Aev05g0932 458 PANTHER PROTEIN FIZZY-RELATED 1 16 458 - -
Aev05g0932 458 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 16 458 IPR033010 GO:0010997|GO:0097027|GO:1904668
Aev05g0932 458 MobiDBLite consensus disorder prediction 1 27 - -
Aev05g0932 458 Pfam WD domain, G-beta repeat 309 348 IPR001680 GO:0005515
Aev05g0932 458 Pfam WD domain, G-beta repeat 268 303 IPR001680 GO:0005515
Aev05g0932 458 Pfam WD domain, G-beta repeat 397 433 IPR001680 GO:0005515
Aev05g0932 458 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 271 303 - -
Aev05g0932 458 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0932 Aev-Chr5 6558655 6563102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0932 206 436 Miscellaneous Gene Families AT5G08390 20.940 8.96e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0932 K03364 - gmx:100780928 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0932 05 6558655 6563102 Aev05g0932 05 6558655 6563102 ECH
Aev01g1862 01 23601423 23606583 Aev05g0932 05 6558655 6563102 PCT