Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1862 ATGGAGGATCAAATTCATTCACGATCTTCCTCTTCTTCGAAGCTCAACCTCGCGGAGACTCCTACAATGTCTTCTTCTTCTTCTCTGTCCTTCGATTCCCGCCACGTGGACCGAATGATCAACACCGCGCACCACAATTCCCCTTCTAGAACCATCTACTCCGACAGGTTTATTCCGAGCAGATCTGCCTCTAAATTCGCTCTCTTCGACATCGCCGCGCCAGCTGCGGCGGCGTCGGTGGCGGAGGGACGCGAGGACAGCTCCAGCGCCTACACGACGCTGCTGAGGACGGCGCTTTTTGGACCTGATGCTGCAGGAGTGGCGGCGCCGGTTACTCCGGAGAAGAGGAGCTCGCCAGCGATGACGCTACCTAGCCGGAATATATTCCGTTACAAGATGGAGACTCGGCAGTCGATGCACTCGCTGTCGCCGTTCATGTGCGATGATTCTGTCCCCGGGGGCGTGAATCCCAGCCCCGTCAAGGCTCCGAGGAAGGTTCCTCGATCGCCTTATAAGGTTCTGGATGCACCAGCTCTGCAAGACGATTTTTACTTGAATCTCGTGGATTGGTCTTCGAACAATGTGTTGGCTGTTGGTCTCGGAAACTGTGTTTATCTGTGGAATGCTTGTAGCAGCAAGGTAACTAAACTGTGTGACTTGGGGATTGATGACTGCGTTTGTTCAGTTGGCTGGGCTCAACGTGGTACCCATCTTGCTGTTGGAACCAGCAATGGTAAAGTTCAGATTTGGGATGCATCACGATGCAAGAAGATAAGATCGATGGAGGGCCATCGCTTACGTGTTGGTGCCTTGGCCTGGAGTTCTTCTCTTTTGTCTTCAGGTGGCCGGGATAAGAATATATATCAACGAGATATACGAGCACAGGAAGATTTTGTCAGCAAACTTTCAGGGCACAAATCAGAGGTTTGTGGGCTAAAGTGGTCATATGATAACCGTGAGTTAGCATCCGGAGGAAATGACAACAGATTGTTTGTTTGGAATCAACACTCAACCCAGCCTGTCCTAAAGTACTGTGAGCATACAGCAGCTGTTAAAGCTATAGCATGGTCTCCGCATCTTCATGGACTTCTTGCGTCTGGGGGAGGCACTGCAGATCGCTGTATTCGTTTCTGGAATACAACCACAAACTCACACTTGAGCTGTATGGACACTGGAAGTCAGGTTTGCAATCTTGTTTGGTCTAAAAATGTCAATGAATTGGTAAGCACGCATGGCTACTCCCAGAACCAGATAATAGTTTGGAGATACCCGACCATGTCAAAGTTGGCCACTCTTACAGGCCATACTTATAGAGTTCTTTATCTTGCCATCTCTCCGGATGGACAGACTATTGTAACTGGAGCTGGAGATGAAACACTCAGATTTTGGAATGTATTCCCTTCCCCTAAATCACAGAACACTGACAGTGAAATCGGAGCATCATCTCTTGGAAGAACAATTATTAGGTGA 1470 0.4925 MEDQIHSRSSSSSKLNLAETPTMSSSSSLSFDSRHVDRMINTAHHNSPSRTIYSDRFIPSRSASKFALFDIAAPAAAASVAEGREDSSSAYTTLLRTALFGPDAAGVAAPVTPEKRSSPAMTLPSRNIFRYKMETRQSMHSLSPFMCDDSVPGGVNPSPVKAPRKVPRSPYKVLDAPALQDDFYLNLVDWSSNNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDCVCSVGWAQRGTHLAVGTSNGKVQIWDASRCKKIRSMEGHRLRVGALAWSSSLLSSGGRDKNIYQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSEIGASSLGRTIIR* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1862 489 SMART WD40_4 295 334 IPR001680 GO:0005515
Aev01g1862 489 SMART WD40_4 254 291 IPR001680 GO:0005515
Aev01g1862 489 SMART WD40_4 337 379 IPR001680 GO:0005515
Aev01g1862 489 SMART WD40_4 425 464 IPR001680 GO:0005515
Aev01g1862 489 SMART WD40_4 211 251 IPR001680 GO:0005515
Aev01g1862 489 SMART WD40_4 167 208 IPR001680 GO:0005515
Aev01g1862 489 Gene3D - 160 469 IPR015943 GO:0005515
Aev01g1862 489 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 432 465 - -
Aev01g1862 489 ProSitePatterns Trp-Asp (WD) repeats signature. 451 465 IPR019775 -
Aev01g1862 489 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 302 334 - -
Aev01g1862 489 Pfam WD domain, G-beta repeat 339 379 IPR001680 GO:0005515
Aev01g1862 489 Pfam WD domain, G-beta repeat 299 334 IPR001680 GO:0005515
Aev01g1862 489 Pfam WD domain, G-beta repeat 428 464 IPR001680 GO:0005515
Aev01g1862 489 ProSiteProfiles Trp-Asp (WD) repeats profile. 226 260 IPR001680 GO:0005515
Aev01g1862 489 SUPERFAMILY WD40 repeat-like 179 465 IPR036322 GO:0005515
Aev01g1862 489 ProSiteProfiles Trp-Asp (WD) repeats profile. 432 465 IPR001680 GO:0005515
Aev01g1862 489 MobiDBLite consensus disorder prediction 1 31 - -
Aev01g1862 489 MobiDBLite consensus disorder prediction 8 31 - -
Aev01g1862 489 PANTHER PROTEIN FIZZY-RELATED 1 20 489 - -
Aev01g1862 489 Pfam Anaphase-promoting complex subunit 4 WD40 domain 222 275 IPR024977 -
Aev01g1862 489 ProSiteProfiles Trp-Asp (WD) repeats profile. 302 343 IPR001680 GO:0005515
Aev01g1862 489 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 20 489 IPR033010 GO:0010997|GO:0097027|GO:1904668
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1862 Aev-Chr1 23601423 23606583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1862 238 467 Miscellaneous Gene Families AT5G08390 21.459 2.99e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1862 K03364 - gmx:100780928 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1862 01 23601423 23606583 Aev05g0932 05 6558655 6563102 PCT