Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0903 ATGTCACTGCTGAAGACGGCTTCAGTGTCACACATGGACAACAGCAACATAGGAATTCCCTCCACACCAGGTAAATTGAAACCAGACAAATACCAACCCTACAATTACTACATCCACCGCTTGAGATTATCAAAACTCACCCTATGGTCATCCATATTCCTCGCCTTCATCCTCTTCTTCTTCATCCTCTCCCCTCCCTCTGCCACCTCCTCCTCCTCCGCCGCCGCCACACGCCGCCTTGGTGACTCATGGGGCGGCCACGACTGGGAGAAGCGCGTGAGCAAGTCCGCACGGAAGAACTCCGCTTCCGGCCTCACCGTCCTCGTTACCGGCGCCGCCGGCTTCGTGGGATGCCACGTGTCACTCTCACTTAAGCGCCGCGGCGATGGCGTCCTCGGCCTCGACAACTTCAACCGCTACTACGACCCGAACCTCAAACGCGCCCGCCAGAAGCTCCTCTCACGCGCCGGCGTCTTCGTCGTCGACGGCGACATCAACGACGCCGCACTCCTCCGCAAGCTCTTCGACGTCGTCCCTTTCACCCACGTCATGCACCTCGCCGCACAAGCCGGCGTTCGCTACGCTATGCAGAACCCTCATTCCTACGTTCACAGCAACGTGGCAGGGTTCGTGAACCTTCTAGAAGCTTGCAAATCGGCGAACCCGCAACCCGCGATCGTGTGGGCCTCATCGAGTTCCGTCTATGGGCTCAATTCTAAGGTACCCTTTTCGGAAAAGGACAGAACTGACCAACCGGCGAGTCTATATGCCGCAACCAAAAAAGCCGGTGAAGCCATTGCTCATACCTACAACCATATCTATGGGCTTTCGACTACTGGGTTGCGGTTTTTCACTGTTTATGGACCTTGGGGTAGGCCTGACATGGCTTATTTCTTCTTCACGAAGGACATTCTGAAGGGGAAGCAGATTACAGTGTTTGAGGCTGCTAATGGTGGAACCGTCGCGAGGGATTTCACTTACATTGATGATATTGTGAAGGGGTGTTTGGGGGCTCTGGACACTGCTAAGAAGAGTACAGGGAGTGGTGGGAAGAAGAAGGGTCCTGCGCAGTACAGGATTTATAATTTGGGGAATACTTCGCCGGTGCCGGTGAGCGAGCTTGTGAGTATATTGGAGAAGCTTCTGAAGGTGAAGGCTAAGAAGAAGGTGATGCCGATGCCAAGGAATGGGGATGTTCAGTTCACGCATGCAAATATTAGCAAAGCGCACAGTGAGATTGGGTACATGCCTACCACTGATTTGGAGACAGGGCTCAGGAAGTTTGTCAAGTGGTACCTTGAATTTTACTCTGCCTCCTCTAAGAAGAAGAGTGCATGGTGA 1341 0.5377 MSLLKTASVSHMDNSNIGIPSTPGKLKPDKYQPYNYYIHRLRLSKLTLWSSIFLAFILFFFILSPPSATSSSSAAATRRLGDSWGGHDWEKRVSKSARKNSASGLTVLVTGAAGFVGCHVSLSLKRRGDGVLGLDNFNRYYDPNLKRARQKLLSRAGVFVVDGDINDAALLRKLFDVVPFTHVMHLAAQAGVRYAMQNPHSYVHSNVAGFVNLLEACKSANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEAIAHTYNHIYGLSTTGLRFFTVYGPWGRPDMAYFFFTKDILKGKQITVFEAANGGTVARDFTYIDDIVKGCLGALDTAKKSTGSGGKKKGPAQYRIYNLGNTSPVPVSELVSILEKLLKVKAKKKVMPMPRNGDVQFTHANISKAHSEIGYMPTTDLETGLRKFVKWYLEFYSASSKKKSAW* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0903 446 Gene3D - 105 438 - -
Aev05g0903 446 PANTHER EPIMERASE-RELATED 17 443 - -
Aev05g0903 446 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 103 437 IPR036291 -
Aev05g0903 446 Pfam NAD dependent epimerase/dehydratase family 107 363 IPR001509 -
Aev05g0903 446 PRINTS Nucleotide sugar epimerase signature 133 149 - -
Aev05g0903 446 PRINTS Nucleotide sugar epimerase signature 358 373 - -
Aev05g0903 446 PRINTS Nucleotide sugar epimerase signature 323 338 - -
Aev05g0903 446 PRINTS Nucleotide sugar epimerase signature 398 415 - -
Aev05g0903 446 PANTHER UDP-GLUCURONATE 4-EPIMERASE 5 17 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0903 Aev-Chr5 6378094 6379434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0903 9 444 Miscellaneous Gene Families AT4G00110 73.529 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0903 K08679 - gmx:100788035 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0903 05 6378094 6379434 Aev05g0903 05 6378094 6379434 ECH
Aev04g3748 04 34765323 34766594 Aev05g0903 05 6378094 6379434 ECH