Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3748 ATGGTGGACAAGCCAATTAGAACGCGATTCCCTTTCTCCATCAACAAGCTCCTCTTCTGGTCCCTAATCTCCTTAACCGTCATCCTCTTCTTCTTCGTCGGATCTCCTCCCACCACCACCACCACCAACTCCGCCCACATCCGCCGCTCCCTCCGAGGCGGTCCTCAATGGGAAACCTCCGTCCGCCGCTCTGCCTCCCCGTCGAGGCCCAGCGGCCACCGCGTCCTCGTCACCGGCGCGGCCGGCTTCGTCGGCACCCACGTGTCCCTGGCCCTGAAGCGGCGCGGCGATGGCGTTGTCGGAATCGACAACTTCAACCGCTACTACGAGCCTAGCCTGAAGCGCGCACGCGCCGATCTGCTCACGCGCGAAGGAGTGTTCGTGGTGGAAGGAGACATCAACGATTCCTCACTGTTGAAATCGCTGTTCAAGATCGTGAAGTTCACGCACGTGATGCACCTCGCCGCGCAAGCCGGTGTTCGCTACGCAATGAAGAACCCTGCATCTTACATTCACAGCAACATTGCTGGGCTCGTCAGTGTTCTGGAGGTGTGCAAGAGCGTGAATCCTCAACCCGCTATTGTCTGGGCTTCTTCGAGCTCTGTTTACGGCCTCAATTCCAAGGTTCCCTTTTCTGAGAAAGACCGAACCGACAAGCCCGCGAGTTTGTACGCTGCGACTAAGAAAGCTGGTGAAGAGATTGCGCACACTTACAACCATATCTACGGGCTCTCAATCACTGGGCTGAGATTCTTCACTGTGTACGGGCCTTGGGGGAGGCCCGACATGGCATATTTCTTCTTCACGAGGGACATTCTGAAGGGGAAGCAGATTCAGATATTTGAAGGGGCAGATCACAGCTCTGTCGCGAGGGACTTCACCTACATAGATGACATCGTGAAGGGGTGTTTGGGGGCTTTGGACACTGCTGGGAAGAGCACCGGGAGCGGCGGGAAGAAGAGTGGGCCTGCGCAGCTGCGGGTGTTCAATCTTGGCAACACTTCCCCTGTTCAGGTCGGGAAGCTCGTGAGTATATTGGAGAAGTTGCTCAAGCTTCGTGCTAAGAAGAAGCTGATTGCTATGCCCACCAACGGGGATGTGCCTTTCACTCATGCTGATGTCAGCCTGGCCAAGAAGGAGCTTGGCTACAAACCCTCCACGGATTTGGAAACCGGTTTGAGCAAGTTTGTGGATTGGTATTTGGAGTACTATAATGCTGCATCTGCGGGGGAGAAGCACACCACAAGGGAACCAAAAGTGCTTGCTGAATGA 1272 0.5566 MVDKPIRTRFPFSINKLLFWSLISLTVILFFFVGSPPTTTTTNSAHIRRSLRGGPQWETSVRRSASPSRPSGHRVLVTGAAGFVGTHVSLALKRRGDGVVGIDNFNRYYEPSLKRARADLLTREGVFVVEGDINDSSLLKSLFKIVKFTHVMHLAAQAGVRYAMKNPASYIHSNIAGLVSVLEVCKSVNPQPAIVWASSSSVYGLNSKVPFSEKDRTDKPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDILKGKQIQIFEGADHSSVARDFTYIDDIVKGCLGALDTAGKSTGSGGKKSGPAQLRVFNLGNTSPVQVGKLVSILEKLLKLRAKKKLIAMPTNGDVPFTHADVSLAKKELGYKPSTDLETGLSKFVDWYLEYYNAASAGEKHTTREPKVLAE* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3748 423 Gene3D - 73 406 - -
Aev04g3748 423 PANTHER EPIMERASE-RELATED 7 408 - -
Aev04g3748 423 PANTHER UDP-GLUCURONATE 4-EPIMERASE 4 7 408 - -
Aev04g3748 423 PRINTS Nucleotide sugar epimerase signature 291 306 - -
Aev04g3748 423 PRINTS Nucleotide sugar epimerase signature 366 383 - -
Aev04g3748 423 PRINTS Nucleotide sugar epimerase signature 326 341 - -
Aev04g3748 423 PRINTS Nucleotide sugar epimerase signature 101 117 - -
Aev04g3748 423 Pfam NAD dependent epimerase/dehydratase family 75 309 IPR001509 -
Aev04g3748 423 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 69 406 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3748 Aev-Chr4 34765323 34766594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3748 7 405 Miscellaneous Gene Families AT4G00110 74.690 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3748 K08679 - gmx:100819586 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3748 04 34765323 34766594 Aev05g0903 05 6378094 6379434 ECH
Aev04g3748 04 34765323 34766594 Aev04g3748 04 34765323 34766594 ECH