Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0353 ATGGCGTCAACCGCACGAAGATCCGCGCACCTCCTCACGCGCCTCCTCCCCTCCACGCGCTTCAATCAGACCCGCTCTGTCACCTACATGCCTCGACCCGGTGACGGCGCCCCGCGCGCCGTCACTCTCATCCCCGGCGACGGGATCGGCCCCCTTGTCACCGGCGCGGTGGAGCAGGTGATGGAAGCGATGCACGCGCCGGTGTACTTCGAGAAGTTCGAGGTCCATGGCGACATGAAGGCGGTGCCGCCGCCGGTGATGGAGTCGATAAGGAAGAACAAGGTGTGCCTGAAGGGAGGGCTGGCGACGCCGATGGGCGGCGGAGTGAGCTCGCTGAATGTGCAGCTGAGGAAGGAGCTCGACCTATACGCATCGCTGGTGAACTGCTTCAATCTCCCTGGGATCCAGACGCGGCACGACAACGTGGACATCGTCGTGATCAGGGAGAACACTGAAGGGGAGTACTCTGGACTCGAGCACGAGGTCGTTCCTGGCGTCGTTGAAAGCCTCAAGGTAATAACAAAGTTCTGTTCAGAGCGTATTGCTAAATATGCATTCGAGTATGCTTACCTAAATAACAGAAAGAAGGTGACTGCTGTGCACAAAGCAAACATTATGAAGCTTGCAGATGGTTTATTCTTGGAATCATGTCGGGAGGTCGCCACAAGGTATCCTGGAATCAAGTACAATGAAATAATTGTAGATAACTGCTGCATGCAGCTTGTGTCAAAGCCTGAGCAATTTGATGTTATGGTAACTCCCAACCTTTATGGAAATCTTGTTGCAAATACAGCAGCAGGTATTGCTGGAGGCACTGGAGTCATGCCAGGAGGTAATGTCGGGGCTGAGCATGCCGTTTTTGAGCAAGGTGCTTCAGCAGGAAACGTTGGTAGTGCAAAAGAAGTGGAAGAAAAGAAAGCCAACCCTGTCGCACTGCTTCTCTCGTCGGCCATGATGCTTAGACATCTCCAGTTTCCGGCATTTGCTGACCGACTGGAAACCGCTGTGAAACGAGTCATTCTTGAAGGCAATCACCGGACAAAGGACCTTGGAGGGACAAGCACCACTCAAGAGGTTGTTGATGCGGTGATAGATGCTTTAGACTGA 1107 0.5375 MASTARRSAHLLTRLLPSTRFNQTRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFEKFEVHGDMKAVPPPVMESIRKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGIQTRHDNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATRYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGSAKEVEEKKANPVALLLSSAMMLRHLQFPAFADRLETAVKRVILEGNHRTKDLGGTSTTQEVVDAVIDALD* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0353 368 SMART Iso_dh_2 40 363 IPR024084 -
Aev05g0353 368 Pfam Isocitrate/isopropylmalate dehydrogenase 41 363 IPR024084 -
Aev05g0353 368 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 40 367 - -
Aev05g0353 368 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 18 365 - -
Aev05g0353 368 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 37 366 IPR004434 GO:0006099
Aev05g0353 368 PANTHER NAD-DEPENDENT ISOCITRATE DEHYDROGENASE C,1 18 365 - -
Aev05g0353 368 Gene3D Isopropylmalate Dehydrogenase 28 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0353 Aev-Chr5 2527661 2530654 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0353 K00030 - gmx:100778831 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0353 05 2527661 2530654 Aev05g0353 05 2527661 2530654 ECH
Aev05g0353 05 2527661 2530654 Aev01g0125 01 1030861 1033655 PCT