Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0125 ATGGCGGCCACCACCGCAACCAAAAAATCCCTATCACTCCTTAAACATTATCTCATCTCGTCGTCCTCTAGATCCCAAGTATTCTCTAGATCCGTGACCTACATGCATCGTCCCGGGGAGGGCTCTCCCCGCCCCGAGGACGGCTCTCTTCGTTGTGTAACCCTCATCCCTGGTGATGGTATTGGCCCCCTCGTCACCGGCGCCGTCGAGCAAGTCTTTGAGGCTATGCACGCCCCGATCTCCTTTGAGAAGTTCGACATTCATGGCAACATGAAAACCGTCCCTAAAGAGGTCCTCGACTCAATCCAAAAGAACAAGGTTTGTCTTAAAGGAGGGCTGGCGACGCCGGTGGGAGGAGGTGTTAGTTCCCTTAACGTACAGTTGAGGAAGGAGCTCGATCTCTATGCGTCGCTGGTGAATTGCTTCAATCTGCCAGGGTTGAAGACGAGGCACGACAATGTTGACATTGTTGTGATTAGGGAGAATACTGAAGGTGAATATGCTGGCCTTGAACATGAGGTTGTTCCTGGCGTCATTGAAAGCCTTAAGGTAATAACAAAGTTCTGCTCAGACCGTATTGCAAAATATGCATTTGAGTATGCATACCTAAATAACAGAAAGAAAGTGACAGCTGTGCACAAAGCAAATATAATGAAGCTTGCAGATGGTTTGTTCTTGGAATCTTGTAGAGAGATTGCAAAAGACTACCAAGGAATCAAGTATGAAGAGATCATTGTTGATAATTGTTGTATGCAACTTGTTTCAAAGCCAGAGCAATTTGATGTCATGGTAACCCCAAATCTTTATGGAAATCTAGTTGCAAATACTGCAGCAGGCATTGCTGGAGGCACTGGAGTCATGCCAGGAGGGAATGTTGGGGCAGAGCATGCAATATTTGAGCAAGGAGCATCAGCAGGGAATGTTGGAAATGAGAAAATACTGCAACAAAAAACAGCAAACCCTGTTGCACTTCTTCTGTCCTCTGCTATGATGCTTAGGCATCTCCAATTCCCTTCATTTGCTGACAGATTAGAAACTGCTGTCTTAAGAGTGATTCTTGAAGGAAAATGCAGAACAAAGGATCTTGGAGGAACAAGCACCACTCAAGAGGTTGTTGATGCAGTTATTAAGACCTTAGCTTGA 1143 0.4584 MAATTATKKSLSLLKHYLISSSSRSQVFSRSVTYMHRPGEGSPRPEDGSLRCVTLIPGDGIGPLVTGAVEQVFEAMHAPISFEKFDIHGNMKTVPKEVLDSIQKNKVCLKGGLATPVGGGVSSLNVQLRKELDLYASLVNCFNLPGLKTRHDNVDIVVIRENTEGEYAGLEHEVVPGVIESLKVITKFCSDRIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREIAKDYQGIKYEEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAIFEQGASAGNVGNEKILQQKTANPVALLLSSAMMLRHLQFPSFADRLETAVLRVILEGKCRTKDLGGTSTTQEVVDAVIKTLA* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0125 380 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 51 379 IPR004434 GO:0006099
Aev01g0125 380 Gene3D Isopropylmalate Dehydrogenase 44 379 - -
Aev01g0125 380 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 18 378 - -
Aev01g0125 380 SMART Iso_dh_2 52 375 IPR024084 -
Aev01g0125 380 Pfam Isocitrate/isopropylmalate dehydrogenase 53 375 IPR024084 -
Aev01g0125 380 PANTHER ISOCITRATE DEHYDROGENASE [NAD] REGULATORY SUBUNIT 2, MITOCHONDRIAL 18 378 - -
Aev01g0125 380 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 52 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0125 Aev-Chr1 1030861 1033655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0125 K00030 - gmx:100777867 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0353 05 2527661 2530654 Aev01g0125 01 1030861 1033655 PCT