Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0004 ATGAGCAAACAACTGAATTTCCTCTGCCTCTTTATCCTCTTCTCAGTCTCATCATCATTTCTCAGTGTTTCTTGTGAAGACAACAACGACAACAACCCATTCACGCCAAAGGCGTTTCTGATTCGCTATTGGGACAAAGAGATCCGCAACAACCTACCAAAACCACCTTTTCTTCTCTCCAAGGCGTCACCTTTAACCGCCGTCGACGCGGCGGCGTTCTCCAAGCTCGCCGCCGTCAACACCCTCTTCACGCGCCTCCCCCAATTCTGCGCTGCGGCGAACCTCCTCTGTTTCCCGGAGCTCAGCCCTGAGCTCGACAAGCACGACAAGGACGCACACTTCTCCGTCTACGGCGACAAGAACTTCACCAACTACGGAACTGGTCGACCCGGCGGGTCAGACTCGTTCAAGAACTACTCCGAGTCCGCCAACATCCCGGTGAACGATTTCCGCCGCTACGGTCGTGACTCCGCCGGTCACTCCGAGAGCTTCCTCAGCTACTCAACCGAAGGCAACGTCGTCGACCAGGGCTTCCACAGCTACGGCGCCGGAGCAACTGGTGGCACCGGCGGTTTCACTCGTTACGCCGAAGAGACCAATGTCCCTGACCTAGGGTTCACATCCTACTCCGATAGCGCCAACGGGAGGAAGCAATCTTTCAATTCCTACTCAGAAAACGGCAATGCCGGCGAACAATCATTCTCTTCCTATGGAAAAAATGGAAACGGACCAGAGAACCAGTTCCTCTCGTACGGAACAGGGTCCAATGTTGTCGGTTCCGGGTTCTCTAATTACGCCGAGAATTCAAACGGTGCGAACGACTCGTTCAAGGGTTACGGTGTTGACATGAACAACCCTACCAACACCTTCTCTAATTACGCCGATGGAGTGAACGGCGCCGTTGAGAAATTTTCCAATTACAGAGACAGAGCCAATGTAGGTGCGGATTCGTTCAGTTCTTATGCTAAAGGCTCCAATGCCGCGAAAGTTGGGTTTGATAATTACGGAAAATCATTCAACGAAGGGACCGATACGTTCGCGGGTTACGGGAAAGGCTCAACAGGGGGAACCGAAGTTGGGTTCACGGGCTATGGCGTGAACAACACCTTCAAGGAGTATTCGAAAGACGGAGTTTCGTTCGCGAGGTACACAAATGTGAGCACTATGTTGAGTTCATCCATGGCAAAAACGAAGGGTTCAGGGATCAGTGGCAATTTGGTAAATAAATGGGTTGAACCGGGCAAATTCTTCAGGGAGAAGATGCTGAAGGAAGGGACGGTGATGCCCATGCCAGATATTAGGGATAAAATGCCCAAAAGGTCGTTTTTGCCCCGGACCATATTGTCGAAACTGCCCTTCGCGTCTTCGAAGCTCACTGAGCTGAAGCAGATTTTCAAGGCTTCAGATAATGGCGGCATGGAGAAGATGATGAGGGAGTCACTGGAAGAGTGCGAGAGGGTGCCCAGCCCAGGCGAGACGAAACGGTGCGTTGGGTCCATGGAGGACATGATTGACTTTTCAACCTCGGTTCTGGGTCGGAATATCGTGGTTCGGACTACCCAGAATGTAAACGGGTCGAAGAATAAAGTTTTGGTGGGTAAGGTTAGTGGGATCAATGGTGGAAGGGTCACGCAATCTGTTTCGTGCCATCAGAGCCTTTTCCCTTACTTGCTGTATTATTGCCACTCCGTTCCTAAGGTTCGGGTCTACGAAGCGGATCTGCTTGACCCGAGTACTAAGGCGAAGATTAACCACGGTGTTGCGATTTGCCACTTGGATACATCCGCTTGGAGCCCCACTCATGGTGCGTTTCTTGCTCTCGGGTCAGGCCCGGGTCGGATCGAGGTTTGCCATTGGATCTTTGAGAATGACATGACTTGGACCGTTGCTGATTGA 1896 0.519 MSKQLNFLCLFILFSVSSSFLSVSCEDNNDNNPFTPKAFLIRYWDKEIRNNLPKPPFLLSKASPLTAVDAAAFSKLAAVNTLFTRLPQFCAAANLLCFPELSPELDKHDKDAHFSVYGDKNFTNYGTGRPGGSDSFKNYSESANIPVNDFRRYGRDSAGHSESFLSYSTEGNVVDQGFHSYGAGATGGTGGFTRYAEETNVPDLGFTSYSDSANGRKQSFNSYSENGNAGEQSFSSYGKNGNGPENQFLSYGTGSNVVGSGFSNYAENSNGANDSFKGYGVDMNNPTNTFSNYADGVNGAVEKFSNYRDRANVGADSFSSYAKGSNAAKVGFDNYGKSFNEGTDTFAGYGKGSTGGTEVGFTGYGVNNTFKEYSKDGVSFARYTNVSTMLSSSMAKTKGSGISGNLVNKWVEPGKFFREKMLKEGTVMPMPDIRDKMPKRSFLPRTILSKLPFASSKLTELKQIFKASDNGGMEKMMRESLEECERVPSPGETKRCVGSMEDMIDFSTSVLGRNIVVRTTQNVNGSKNKVLVGKVSGINGGRVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPSTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGRIEVCHWIFENDMTWTVAD* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0004 631 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Aev05g0004 631 MobiDBLite consensus disorder prediction 217 249 - -
Aev05g0004 631 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 11 631 - -
Aev05g0004 631 ProSiteProfiles BURP domain profile. 416 630 IPR004873 -
Aev05g0004 631 Pfam BURP domain 416 628 IPR004873 -
Aev05g0004 631 SMART BURP_2 414 630 IPR004873 -
Aev05g0004 631 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 11 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0004 Aev-Chr5 26790 28826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0004 - - gmx:100797939 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0004 05 26790 28826 Aev05g0004 05 26790 28826 ECH
Aev05g0004 05 26790 28826 Aev03g0554 03 4059165 4061160 PCT