Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0554 ATGATGACCACCCTCCTCTTCCTCCTTTTCTCCTCATCACTCACCGTTGGTTTCGCCGCCGACACAAACCCGTTCACACCGAAGGCCTTCGTGATTCGGTATTGGGAGAAAGCGATCCGCAACGAACTTACAAAGCCATCCTTCCTCATCTCCAAGGCCTCACCATTAACCGCCATCGAAGCCGCGAAATTCGCCAAACTCGCGGATACAAACGCGCTCTCCACGCGCCTCCCTGAATTCTGCTCCGCCGCGAACCTCCTCTGCTTCCCGGACACCGTCAAGCCCAGCCTCGCCAAACACCCCTTCGGAGGCAAATTCTCCACCTACGGCGACGGCGAGAATTTCACCAACTACGGGACTAATGGTGCCGGCCCCTTCAGCTCCTTCACGAGCTACTCCGACGGCTTATCCACCATTCGTGTCAACGAATTCCGAAGCTACAGCCGATCCTCCGCCGGTGGCAGCGAGAGTTTCGTCAGCTACGGCAACGAAGGCAACGTCGTCGACGAGAGCTTCCACACCTACGGTACCAACACCGGCGGCGGCACCGGCGAGTTCACCCGTTACACAACCAGAGCCAACGTGCCAGACCTCCGGTTCACCACTTACTCCACCGGCGCCGCCGGGAGGGAGGAGAGATTCTCCAAGTACAGCGACGACGGGAACGCCGGAGGACAGAGCTTCGCGAACTACGGCAAGAGCGCGGCGGCGGAGCTGAGCGAATTCAACAGCTACGGTAACAATTCGAACGTGGCGGCATCGTCGTTCTCGAATTACGGCGAGAAGGGAGCGAGTCCGAACGACACGTTCACGAATTACGGCGTGAATATGAATAACCCGACAGAGACGTTCAAGACCTATGGTGCCGGAACCGCCGGTGGGATTCAGAGCTTCAAGACGTACAGGGATCAATCCAATGTGGGTGCGGACTCGTTCGAGTCGTATGTTAAGGGATCGTTTCTGGGATCGGAGGTGGAGTTCACAAACTACGGAAAGTCCTTCAATGAAGGGACTGATAGCTTCAAAGGCTACGCCATTAACGCATCTCGAGATCCCAAGGTTGGGTTCAAGGAATACTACGGTGTCAACAACACCTTCAAGGATTACAACAACAAAAAAGCTGTCTCATTCTCAAGCTACACCAATGGCAGCGCATCATCATCATCATCCACTTCTTCTTCCCATAGGTGGGTTGAGGCAGGCAAGTTCTTCCGCGAGACCATGCTGAAGGAAGGCACAATCATGCCCATGCCAGATATCAAGGACAAGATGCCCAAAAGGTCTTTTTTGCCCCGATCCATTTTGACCAAATTGCCCTTCACTGCTTCTGAGCTCAAGCGCGTGTTCAAGGCCTCCGATGAGTCCTCCATGGACAAGATGATAAAGGACTCGTTGGGTGAGTGCGAGAGGGCACCCAGCATGGGCGAGACGAAACGGTGCGTTGGATCCGTGGAGGACATGATTGACTTTGCAACGTCGGTTTTGGGTCGTGACATTACGGTTCGGAGCACCGCGAATGTGAATGGGGCGAAGAAGAAAGTGATGGTGGGTCAAGTTACAGGGATCAATGGCGGTAAGGTCACTCGATCTGTTTCTTGTCACCAAAGTTTGTTCCCTTATTTGCTGTATTACTGCCACTCTGTTCCTAAGGTTCGGGTCTACCAAGCGGATCTTCTCGACCCGACTTCTAAGGCTAAGATTAACCACGGTGTTGCCATCTGTCACTTGGATACTTCTGCTTGGAGTGCTACCCATGGGGCTTTCTTGGCTCTTGGGTCGGGTCCGGGTCGGATTGAAGTGTGCCATTGGATCTTTGAGAATGATATGACTTGGACCATTGCTAATTGA 1848 0.5384 MMTTLLFLLFSSSLTVGFAADTNPFTPKAFVIRYWEKAIRNELTKPSFLISKASPLTAIEAAKFAKLADTNALSTRLPEFCSAANLLCFPDTVKPSLAKHPFGGKFSTYGDGENFTNYGTNGAGPFSSFTSYSDGLSTIRVNEFRSYSRSSAGGSESFVSYGNEGNVVDESFHTYGTNTGGGTGEFTRYTTRANVPDLRFTTYSTGAAGREERFSKYSDDGNAGGQSFANYGKSAAAELSEFNSYGNNSNVAASSFSNYGEKGASPNDTFTNYGVNMNNPTETFKTYGAGTAGGIQSFKTYRDQSNVGADSFESYVKGSFLGSEVEFTNYGKSFNEGTDSFKGYAINASRDPKVGFKEYYGVNNTFKDYNNKKAVSFSSYTNGSASSSSSTSSSHRWVEAGKFFRETMLKEGTIMPMPDIKDKMPKRSFLPRSILTKLPFTASELKRVFKASDESSMDKMIKDSLGECERAPSMGETKRCVGSVEDMIDFATSVLGRDITVRSTANVNGAKKKVMVGQVTGINGGKVTRSVSCHQSLFPYLLYYCHSVPKVRVYQADLLDPTSKAKINHGVAICHLDTSAWSATHGAFLALGSGPGRIEVCHWIFENDMTWTIAN* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0554 615 Pfam BURP domain 403 612 IPR004873 -
Aev03g0554 615 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 5 614 - -
Aev03g0554 615 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 5 614 - -
Aev03g0554 615 SMART BURP_2 401 614 IPR004873 -
Aev03g0554 615 ProSiteProfiles BURP domain profile. 403 614 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0554 Aev-Chr3 4059165 4061160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0554 - - gmx:100811362 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0554 03 4059165 4061160 Aev03g0554 03 4059165 4061160 ECH
Aev05g0004 05 26790 28826 Aev03g0554 03 4059165 4061160 PCT