Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1425 ATGGCTTCCACTTCAGCAGTTTCAATGGCTATGCCTCTAACTTACTCCAGCCAGAAGAAGGTGGTGCCTGGTTCTGAGTCATTCTTCAAGCCACTCCCTCTAAGGCCTTCAAAGGCTGTGGTAGCAGCATCAAAACCCAGTGGAAGGGTCCAAGTCAGTGCCTCCATGAAGGAGAAGGTCGTGACCGGGCTCACGGCAGCCGCATTGACGGCTTCAATGATGGTTCCTGATATGGCTGAGGCTGCTGTTACTCCTTCTCTCAAGAACTTCCTGCTCAGCATCGCCGCTGGTGGAGTTGTGGTTGTAGTCATCATTGGTGCAGTGGTTGGTGTCTCCAATTTCGATCCTGTTAAGCGAGGCTGA 363 0.5234 MASTSAVSMAMPLTYSSQKKVVPGSESFFKPLPLRPSKAVVAASKPSGRVQVSASMKEKVVTGLTAAALTASMMVPDMAEAAVTPSLKNFLLSIAAGGVVVVVIIGAVVGVSNFDPVKRG* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1425 120 Gene3D Single helix bin 82 120 - -
Aev04g1425 120 PANTHER OS07G0673550 PROTEIN 1 119 - -
Aev04g1425 120 Pfam Photosystem II reaction centre X protein (PsbX) 83 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
Aev04g1425 120 PANTHER EXPRESSED PROTEIN 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1425 Aev-Chr4 10008954 10009316 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1425 - - gmx:100306291 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2712 01 29888045 29888416 Aev04g1425 04 10008954 10009316 PCT