Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2712 ATGGCTTCAACTTCAGCAGTTTCAATGGCTATGCCACTAGCCTACGCCAGCCAGAAGAGGGTGGTTCCAAGCTCCGATGCATCATTGTTCAAGGCTCCACTGCCTCTGAGGACTTCAAAGGCGGTGGCAGTGGCAGCATCAAAGGGCAATGGAAGGTTTCAAGTGAAGGCGTCCATGAAGGAGAAGGTTGTGACAGGGCTCACAGCAGCTGCATTGACAGCTCAGATCATGGTTCCTGATGTGGCTGAAGCTGCTGTCAGTCCTTCTCTCAAGAACTTTCTGCTCAGCATCGTCGCTGGTGGTGTTGTCGCTGTAGCAATTGTTGGTGCCGTCATCGGTGTCTCCAATTTCGATCCTGTCAAGCGAAGCTGA 372 0.5242 MASTSAVSMAMPLAYASQKRVVPSSDASLFKAPLPLRTSKAVAVAASKGNGRFQVKASMKEKVVTGLTAAALTAQIMVPDVAEAAVSPSLKNFLLSIVAGGVVAVAIVGAVIGVSNFDPVKRS* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2712 123 Pfam Photosystem II reaction centre X protein (PsbX) 86 123 IPR009518 GO:0009523|GO:0015979|GO:0016020
Aev01g2712 123 PANTHER OS07G0673550 PROTEIN 1 123 - -
Aev01g2712 123 PANTHER EXPRESSED PROTEIN 1 123 - -
Aev01g2712 123 Gene3D Single helix bin 85 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2712 Aev-Chr1 29888045 29888416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2712 - - gmx:100306291 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2712 01 29888045 29888416 Aev01g2712 01 29888045 29888416 ECH
Aev01g2712 01 29888045 29888416 Aev04g1425 04 10008954 10009316 PCT