Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1358 ATGAGTAGAAGAAAGGGCCCAATTATGGGGATTCAAATAATAATTGTGCTTATTGTTATTATAGGCAACACTTGTGGGGTGAAAGGTAACTTTTACCAAGACGTAGAAGTGACATGGGGTGATAACCATGCCAAAATCCTTAACAACGGAGAGCTCCTCACACTGTCCTTGGACAAGGCCTCTGGCTCTGGCTTCCGCTCCAAGAATCAATATTTGTTCGCCAAAATTGACATGCAAATCAAGCTTGTTCCTGGCAACTCCGCTGGCACCGTTACTACCTACTATTTGTCTTCTATGGGGCCTACTCATGACGAAATAGACTTTGAATTTTTGGGGAACTTGAGTGGTGATCCTTATATTCTTCACACAAATGTATTCGCCCAAGGCAAAGGAAACAGAGAGCAGCAATTCTATCTATGGTTCGATCCCACCAAGGACTTCCACACATATTCCATTCTTTGGAATCCCCAAAGCATCATATTCTATGTGGATGGAACACCAATAAGGGAGTTCAAGAACTTGGAGTCAAAGGGGGTGGCATTCCCAAAGAGCCAAGCAATGAGATTGTACTCAAGCCTGTGGAATGCTGATGATTGGGCCACAAGGGGTGGGCTTGTCAAGACTGATTGGGCCCAGGCCCCATTCATTGCCTCTTACAGAAACTACAATGCACAGGCCTGTGTTAGGGCTTCTTCAGGCTCCTCTTCTTGTAACCCTACTTCTTCGTCATGGATGGGCCAATCACTTGATGCTTCGGGCCTTGCCAGAATCCATTGGGTCCAAAAGAATTACATGATCTATAATTATTGCACTGACTCCAAACGCTTCCCACAGGGTTTCCCTCCTGAATGCTCATTTGCATGA 864 0.4525 MSRRKGPIMGIQIIIVLIVIIGNTCGVKGNFYQDVEVTWGDNHAKILNNGELLTLSLDKASGSGFRSKNQYLFAKIDMQIKLVPGNSAGTVTTYYLSSMGPTHDEIDFEFLGNLSGDPYILHTNVFAQGKGNREQQFYLWFDPTKDFHTYSILWNPQSIIFYVDGTPIREFKNLESKGVAFPKSQAMRLYSSLWNADDWATRGGLVKTDWAQAPFIASYRNYNAQACVRASSGSSSCNPTSSSWMGQSLDASGLARIHWVQKNYMIYNYCTDSKRFPQGFPPECSFA* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1358 287 ProSitePatterns Glycosyl hydrolases family 16 active sites. 105 115 IPR008263 GO:0004553|GO:0005975
Aev04g1358 287 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 11 286 IPR044791 GO:0004553
Aev04g1358 287 CDD GH16_XET 27 284 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aev04g1358 287 PIRSF EndGlu_transf 7 287 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aev04g1358 287 Gene3D - 17 286 - -
Aev04g1358 287 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 11 286 - -
Aev04g1358 287 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 25 219 IPR000757 GO:0004553|GO:0005975
Aev04g1358 287 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 240 284 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Aev04g1358 287 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 286 IPR013320 -
Aev04g1358 287 Pfam Glycosyl hydrolases family 16 32 211 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1358 Aev-Chr4 9366988 9368350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1358 8 284 Glycoside Hydrolase AT4G25810 68.794 3.85e-147 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1358 K14504 K08235 gmx:100807063 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2663 01 29589728 29591027 Aev04g1358 04 9366988 9368350 PCT