Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1327 ATGGCCACCATCACCCCCCAAAACGGCACCGCTTCGACTCACGAGACCGACCCCACTCCACTCCCTGAATCCGCCGCCGCCGCCACCACTCCGGCGGAGAAGAGATGGCCGGGTTGGCCCGGAGAGTGCGTGTTCCGGCTGATCGTTCCGGTGGGTAAGGTTGGAAGCATCATCGGCCGAAAGGGCGAGCTCGTCAAGAAGACCTGCGAAGAGACCCGCGCTCGCATTCGAGTCCTCGACGCCGCCCCTGGCACCCCCGATCGAGTTGTACTGATAACAGGGAAGGAAGAGCCAGAGGTGGCTTTTTCCCCTGCAATGGATGCTACTATAAGGATATTCAAGCGTGTATCTGGATTACCTGAAACTGACAGTGAGAATATAGGATCTGCTGGTGCTGTATTTTGTTCCATCCGCTTGTTGGTGGCATCAACACAGGCTATCAATTTGATTGGAAAACAAGGGTCGTCAATCAAATCTATACAGGAGACTACTGGTGCTTCTATTAGAGTATTGTCAGTAGATGAGGTGAAATTTTATGCTGCTGCGGATGAGAGGATTGTAGAACTGCAGGGAGAAGCCTTGAAGGTCCTTAAAGCTCTGGAAGCAGTAGTTGGCCATCTAAGAAAGTTTTTGGTTGACCATAGTGTTCTTCCTCTATTTGAAAAAACTTACAATGCACCGACCTCACAAGACCAACAAGCAGAGACCTGGTCTGACAAGCCATTGCAGCATACTGCTCCACAAACGAGCATTTTTGCTGATATTCCTCTTTCAACAAAAAGGGATTCTCTTTTTGCTGATCGTGAAAGTCATTTGGACTCATTACTGGCCTCCTCCACTATGTCTGTCTATGGGCAAGATTCTTCACTTTCTGGTATTCGCTCTTCAGCGCTTAGTCGTGTTGCTGCTCCTATTGTTACTACGGTGATACAAACAATGCAAATACCATTATCATATGCAGAGGACATCATTGGTATTCAAGGGACTAATATTGAATACATTCGCCGTTCTAGTGGAGCCATATTGACCGTTCAAGAAAGCAGGGTGCCTGATGAAATTGTCGTGGAAATAAAAGGCACTTCCTCTCAGGTCCAAACGGCACAACAATTGATTCAGGAAGTTATAAGCAACCACAAAGAACCTGTCACTAGCAGTTACAGCAGGTTAGATGCAGACCTGAGGCCTACATACTCTAAATTGGGCAGTACGTCGCGCACCTCAGCCTCGTTGTCTTCACAATCGTACTCCGGTTATGGAGCTTCCGGTTTAGGAGACTATAGCACTTTCAGACTCTAA 1296 0.4815 MATITPQNGTASTHETDPTPLPESAAAATTPAEKRWPGWPGECVFRLIVPVGKVGSIIGRKGELVKKTCEETRARIRVLDAAPGTPDRVVLITGKEEPEVAFSPAMDATIRIFKRVSGLPETDSENIGSAGAVFCSIRLLVASTQAINLIGKQGSSIKSIQETTGASIRVLSVDEVKFYAAADERIVELQGEALKVLKALEAVVGHLRKFLVDHSVLPLFEKTYNAPTSQDQQAETWSDKPLQHTAPQTSIFADIPLSTKRDSLFADRESHLDSLLASSTMSVYGQDSSLSGIRSSALSRVAAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRSSGAILTVQESRVPDEIVVEIKGTSSQVQTAQQLIQEVISNHKEPVTSSYSRLDADLRPTYSKLGSTSRTSASLSSQSYSGYGASGLGDYSTFRL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1327 431 ProSiteProfiles Type-1 KH domain profile. 134 203 - -
Aev04g1327 431 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER 30 420 - -
Aev04g1327 431 Gene3D - 42 211 - -
Aev04g1327 431 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 30 420 - -
Aev04g1327 431 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 134 215 IPR036612 GO:0003723
Aev04g1327 431 SMART kh_6 41 117 IPR004087 GO:0003676
Aev04g1327 431 SMART kh_6 133 208 IPR004087 GO:0003676
Aev04g1327 431 SMART kh_6 307 376 IPR004087 GO:0003676
Aev04g1327 431 CDD PCBP_like_KH 44 113 - -
Aev04g1327 431 ProSiteProfiles Type-1 KH domain profile. 42 109 - -
Aev04g1327 431 MobiDBLite consensus disorder prediction 1 19 - -
Aev04g1327 431 CDD KH-I 310 372 - -
Aev04g1327 431 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 36 97 IPR036612 GO:0003723
Aev04g1327 431 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 303 377 IPR036612 GO:0003723
Aev04g1327 431 Pfam KH domain 45 97 IPR004088 GO:0003723
Aev04g1327 431 Pfam KH domain 137 203 IPR004088 GO:0003723
Aev04g1327 431 Pfam KH domain 311 373 IPR004088 GO:0003723
Aev04g1327 431 Gene3D K Homology domain, type 1 307 381 IPR036612 GO:0003723
Aev04g1327 431 CDD PCBP_like_KH 136 204 - -
Aev04g1327 431 MobiDBLite consensus disorder prediction 1 34 - -
Aev04g1327 431 ProSiteProfiles Type-1 KH domain profile. 308 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1327 Aev-Chr4 8977365 8983790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1327 K21444 - gmx:100815466 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2634 01 29381820 29385049 Aev04g1327 04 8977365 8983790 PCT