Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2634 ATGGCCACCGCTACCGCCCAACCAATCCAAAACGGCACCTCCAACGCCCCACAACCAATCCCATCGGAGAATGCCTCCGATGCCGGACCACCTTCCACCACCATCGACACAGCAGCCACCACCGAATCTACTGCCCTAGACGATGCAAACCCTGGAACTGAGGATCCTGAATCTGATGCAGCTCTGGCGGCAACCGGCGCCGCCGATACTACTCCGCCGGAGAAGCGGTGGCCCGGATGGCCTGGCCAGTGCGTGTTCCGGCTCATCGTGCCGGTGCTGAAGGTAGGGAGCATCATTGGACGGAAGGGCGAGCTCGTCAAGAAGATGTGTGAAGAGACACGAGCTCGCATTCGCGTCCTCGACGGCGCCGTCGGCACTACCGATCGAATTGTGCTTATATCGGGGAAGGAAGAACCAGAGGCACCATTTTCTCCTGCAATGGATGCTGTTTTAAGGGTTTTTAAACGTGTCTCGGGGATACCTGAAACAGACAGTGAGAAAGGAGCTTCCATGGTTACAGTTTGTTCTGTCCGTTTATTGGTGGCATCAACACAGGCCATCAATTTGATTGGAAAGCAGGGCTCATTAATCAAATCAATACAGGAAAATACTGGTGCTTCAGTTAGAGTATTGTCAGGAGATGAGGTGCCATTTTATGCTGCTGCCGATGAGAGGATTGTAGAAATTCAAGGAGAAGCATTGAAGGTGCTTAAGGCTTTAGAAGCAGTAGTTGTGCACCTTCGGAAGTTTTTGGTTGATCAAAGTGTTCTTCCTCTGTTTGAGAAAGCTTACAACGCAACACTCACCCAAGACCGTCAGGCAGATACCTGGTCTGACAAGCCATCACTGCATAGTGCACCACAACCTAGCATTGTTGCTGATGTTCTTCTTCCAACAAAAAGAGACTCTCTCTTTGCTGATCGTGAAAGTCAACTGGATTCATTACTCGCCTCCTCCTCAGTGTCACTATATGGGCAAGATTCTTCACTTTCTGGTCTTCGTTCTTCAGCTCTGAATTCATCAGCTCTCAGTCGTGGCGGTGCTCCTCCCATTGTTACTACGGTTATACAAACAATGCAAATACCACTGTCCTATGCAGAGGACATCATTGGTATACAAGGGACCAATATCGATTACATTCGCCGTACTAGTGGAGCCATATTGACTGTGCAGGAGAGCAGGGTGCCTGATGAAATCATTGTGGAAATAAAAGGCACCTCATCCCAGGTTCAATTGGCACAACAATTAATCCAGGAGGTTATAAGTAATCACAAAGACAGCAGGTTAGATACAGGTCTGAGGTCTTCTTACTCTCAACTGGGAAGTTCATCATACTCCTCATCTTCATTGTCCTCACAACCATACACTGGATATGGATCTTCTGGTCTTGGAGGCTACAGTTCTTTCAGACTTTAG 1416 0.488 MATATAQPIQNGTSNAPQPIPSENASDAGPPSTTIDTAATTESTALDDANPGTEDPESDAALAATGAADTTPPEKRWPGWPGQCVFRLIVPVLKVGSIIGRKGELVKKMCEETRARIRVLDGAVGTTDRIVLISGKEEPEAPFSPAMDAVLRVFKRVSGIPETDSEKGASMVTVCSVRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVEIQGEALKVLKALEAVVVHLRKFLVDQSVLPLFEKAYNATLTQDRQADTWSDKPSLHSAPQPSIVADVLLPTKRDSLFADRESQLDSLLASSSVSLYGQDSSLSGLRSSALNSSALSRGGAPPIVTTVIQTMQIPLSYAEDIIGIQGTNIDYIRRTSGAILTVQESRVPDEIIVEIKGTSSQVQLAQQLIQEVISNHKDSRLDTGLRSSYSQLGSSSYSSSSLSSQPYTGYGSSGLGGYSSFRL* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2634 471 Pfam KH domain 86 138 IPR004088 GO:0003723
Aev01g2634 471 Pfam KH domain 177 243 IPR004088 GO:0003723
Aev01g2634 471 Pfam KH domain 357 419 IPR004088 GO:0003723
Aev01g2634 471 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 72 451 - -
Aev01g2634 471 CDD KH-I 356 418 - -
Aev01g2634 471 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 350 424 IPR036612 GO:0003723
Aev01g2634 471 SMART kh_6 173 248 IPR004087 GO:0003676
Aev01g2634 471 SMART kh_6 82 155 IPR004087 GO:0003676
Aev01g2634 471 SMART kh_6 353 422 IPR004087 GO:0003676
Aev01g2634 471 MobiDBLite consensus disorder prediction 1 48 - -
Aev01g2634 471 ProSiteProfiles Type-1 KH domain profile. 83 150 - -
Aev01g2634 471 Gene3D - 83 252 - -
Aev01g2634 471 Gene3D K Homology domain, type 1 353 429 IPR036612 GO:0003723
Aev01g2634 471 ProSiteProfiles Type-1 KH domain profile. 354 417 - -
Aev01g2634 471 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 169 255 IPR036612 GO:0003723
Aev01g2634 471 MobiDBLite consensus disorder prediction 1 78 - -
Aev01g2634 471 ProSiteProfiles Type-1 KH domain profile. 174 243 - -
Aev01g2634 471 CDD PCBP_like_KH 85 154 - -
Aev01g2634 471 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 76 138 IPR036612 GO:0003723
Aev01g2634 471 CDD PCBP_like_KH 176 244 - -
Aev01g2634 471 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER 72 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2634 Aev-Chr1 29381820 29385049 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2634 K21444 - gmx:100802089 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2634 01 29381820 29385049 Aev04g1327 04 8977365 8983790 PCT