Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1319 ATGATTATGCCGCCGGCTCTGGTAGACCCGCTGATGCCGCCGCAGTCGCTGTCTGTGACGGTGGATTCGAGCTCCGCTGATGATTGTCGGAGATCGGCGCCGGGGAATCGGCGATTCGGTGATCTTAGAGGATTGCAGTGGCGTATAAATCTTGGAGTGTTGCCGTCTTCGTCTTCGACTTCAATTGATGATCTTCGTAGGGTCACCGCTGATACTAGAAGAAGGTATGCGAGTTTGAGAAGGCGCCTCCTGGTTGAACCAATTCCAAAAGATGAAAGTAATTCACCTGATCTTGTCATGGACAATCCGCTTTCACAAAACCCAGATAGTACATGGAGTCGCTTTTTCCGTAATGCAGAGCTAGAGAGAATGGTTGATCAGGATTTATCACGTTTATACCCAGAGCATGGGAATTATTTCCAGACATCAGGATGCCAAGGCATGCTAAGACGCATTTTATTACTATGGTGTCTCAGGCACCCAGAGTATGGTTATAGACAAGGAATGCACGAGTTACTTGCTCCTCTGCTTTATGTTCTAGAAGTTGATGTAGAGCGTCTTTCAGAAGTACGAAAGCTTTATGAAGATATTTTCACAGACAGATTTGATGGCCTTTTATATCAAGAGAATGATCTTTCTTACAGCTTTGATTTTAAAAAATCTCCAGACGTGATGGAGGATGAAATTGGCTCCCATGGAAATGCATTGAAAGTCAAAAGTCTTGATGAGCTGGATCCTGCAATACAGACCATTGTATTGCTAAGTGATGCTTACGGAGCTGAAGGTGAATTGGGCATCGTTTTATCTGAGAAATTCATGGAGCATGATGCTTATTGTATGTTTGATGCTTTAATGAATGGTGTCCGTGGATCAGTTGCAATGGCCGACTTCTTCTCTTCCTCCCCTATAGCAGGGTCCCATAGTGGCCTGCCTCCTGTGATTGAAGCTTCTTCTGCATTGTATCGTTTGTTGTCTCTCGTGGATTCATCACTTTATAGCCATCTTTTGGATCTTGGGGTTGAACCCCAGTACTTTTCTCTCAGATGGTTGCGAGTTTTATTTGGGCGAGAATTTTCACTTGACAACCTCTTGATCATCTGGGATGAGATCTTTGCATCAGATAATAGTAAAGTGGAAAAAAGTGTTGACAGTGACATAGACTGGGGTCTGAGGATCATGCATTCACCTCGTGGAGCATTTATCTTAGCCATGGCTGTTGCAATGTTGCTTCATTTGAGATCTTCCCTACTTGCAACTGAAAATCCCACAACCTGCCTTCAGAGATTGTTAAACTTCCCTGAAGACATTAATATTGAAAAGCTACTAGAGAAGGCTAAATCGTTGCAGGCTCAAGCATTAAAAATTGATATTTCATCCTCATTACCTTTATTTGTAGAGTTTAGTCACCAAGGGAAATCAATGTTTGCAAGATCTCAGACTCTTCCGACTGAATCCGTCTCTCCAAAAACTCCTCTGAATTTGATTCCTGATAGTTACTGGGAAGAAAAGTGGAGAGTTGCCCAGAAGGCTGAAGAACATAAGCATGATGATATAGAAAAACAGGTTCCAACTCGGAAAAAGGGTTGGACAGAAAAGGTAAAGTTCAGTTTGAAAAGAACAGAATCTGACCCATCTCCGTCAAGGATTAAGAGTGGGAAAAAGGAATCCAAGCCATCTGTTAGGCGCAGCTTGTTAGAAGATCTTTGTAAGGCACTTGGCTCAGAGGAAGAAGTAGAACAAATGGATTGTCATGAAATTGTATGCCAGCAGGATAATCTTTCTGAAACAGTTGAAGTGGTGCAACAAGATGATGACAGTAAAGTAAACAATTATTCATCTGATGATAGATATCCAAGTGGAAATACGGGCAGTGAGGAATGCTTATCCGTATATTCTGACCCAACTAGTCCTCCTAATGAGGCCAACGATCACGAAATTACCTCAGATGGAAGTAGTGTTGCATCTAATTTATACCTTGATGGTATCTGCAATGAGGCTGCAGATACCAGTCTCAGTGATTCACCTCTTCCAGTCTCTGATGCTCCTGAGAGCTTACCACAGACATCAGGGGGCGATAGTGATGATGGATCCGAGAACATACCTCAGGCATCTGGGTGCAATAATGATGATGCAGGTAGTTCAGCCACACATGTTGAGAGAAAGCAGAACAAATTCCAGTGGCTTTGGAATTTTGGACGGAATACTGTCGAGGCAATATCGGAGAAAGTAGGAGGTGCCTCCGAAACTACAAAATCTGCCAACAGTTCTAGTAACCAAAGTAATACACCGCCACCGGTTTCTTCTACTGCTGATGAGCACTGTAGTTCTGTTAGTAGCAAAGGGGATTCTGTTAGTTGCAAAGGAGATTCAGTAGACCAGAATGTGATGGGCACTTTGAAGAATATTGGACAGTCTATGCTTGACCATATTCAGGTGATTGAATCTGTTTTCCAACAAGACAGGGGCCAAGGAGCCTCATTGGAGAACATATCTAAAAATGTTCTTGTTGGCAAAGGCCAGGTTACTGCCATGGCAGCTCTCAAGGAGCTTCGGAAAATTAGCAATCTTTTGTCCGAAATGTGA 2583 0.4309 MIMPPALVDPLMPPQSLSVTVDSSSADDCRRSAPGNRRFGDLRGLQWRINLGVLPSSSSTSIDDLRRVTADTRRRYASLRRRLLVEPIPKDESNSPDLVMDNPLSQNPDSTWSRFFRNAELERMVDQDLSRLYPEHGNYFQTSGCQGMLRRILLLWCLRHPEYGYRQGMHELLAPLLYVLEVDVERLSEVRKLYEDIFTDRFDGLLYQENDLSYSFDFKKSPDVMEDEIGSHGNALKVKSLDELDPAIQTIVLLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMNGVRGSVAMADFFSSSPIAGSHSGLPPVIEASSALYRLLSLVDSSLYSHLLDLGVEPQYFSLRWLRVLFGREFSLDNLLIIWDEIFASDNSKVEKSVDSDIDWGLRIMHSPRGAFILAMAVAMLLHLRSSLLATENPTTCLQRLLNFPEDINIEKLLEKAKSLQAQALKIDISSSLPLFVEFSHQGKSMFARSQTLPTESVSPKTPLNLIPDSYWEEKWRVAQKAEEHKHDDIEKQVPTRKKGWTEKVKFSLKRTESDPSPSRIKSGKKESKPSVRRSLLEDLCKALGSEEEVEQMDCHEIVCQQDNLSETVEVVQQDDDSKVNNYSSDDRYPSGNTGSEECLSVYSDPTSPPNEANDHEITSDGSSVASNLYLDGICNEAADTSLSDSPLPVSDAPESLPQTSGGDSDDGSENIPQASGCNNDDAGSSATHVERKQNKFQWLWNFGRNTVEAISEKVGGASETTKSANSSSNQSNTPPPVSSTADEHCSSVSSKGDSVSCKGDSVDQNVMGTLKNIGQSMLDHIQVIESVFQQDRGQGASLENISKNVLVGKGQVTAMAALKELRKISNLLSEM* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1319 860 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 309 450 IPR035969 -
Aev04g1319 860 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 4 807 - -
Aev04g1319 860 Gene3D - 313 456 - -
Aev04g1319 860 MobiDBLite consensus disorder prediction 535 560 - -
Aev04g1319 860 SMART tbc_4 29 420 IPR000195 -
Aev04g1319 860 MobiDBLite consensus disorder prediction 600 650 - -
Aev04g1319 860 MobiDBLite consensus disorder prediction 668 718 - -
Aev04g1319 860 MobiDBLite consensus disorder prediction 744 788 - -
Aev04g1319 860 Coils Coil 62 82 - -
Aev04g1319 860 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 4 807 - -
Aev04g1319 860 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 41 334 IPR035969 -
Aev04g1319 860 ProSiteProfiles TBC/rab GAP domain profile. 37 374 IPR000195 -
Aev04g1319 860 MobiDBLite consensus disorder prediction 745 788 - -
Aev04g1319 860 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 105 291 - -
Aev04g1319 860 Pfam Rab-GTPase-TBC domain 122 181 IPR000195 -
Aev04g1319 860 Pfam Rab-GTPase-TBC domain 273 374 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1319 Aev-Chr4 8909271 8913820 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1319 K18469 - gmx:100812967 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2628 01 29349355 29352936 Aev04g1319 04 8909271 8913820 PCT