LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev01g2628	ATGCCTCCAGCTATGGTGGTTCCGCCATTGCCGGAAGAATCGTCGTCGGTGTTCTCGCCTTTGAGCTCCGGCGTCGTTTCTCCGCGATCAGCGTCGGAGAATCGGCGATTAGGTGATCTCAGAGGTTTGCAGTGGCGTATGTGTCTCGGGGTTTTGCCATCTTCGAGTTCCATTGATGATATTCGTCGTGCCACCGCTAATTCTAGAAGGAGGCAAGCCATGCTCAATTATCATGCCTTATACATGCAGTATGCCAGTTTGAGAGGGCGCCTCCTGGTTGATCCTCATATCCCAAAAGATGGAAGTAGTCCACTCAATCTTGTCATGGACAACCCACTTTCACAAAATCCAGACAGTACATGGAGTCGCTTTTTTCGCAATGCGGAGCTGGAGAGGATGGTGGATCAGGATTTATCACGTTTATACCCAGAACATGGCAGCTACTTCCAGACACCAGGATGCCAAGGCTTATTGAGACGAATTTTGTTAATATGGTGTCTCAGACACCCCGAGTGCGGTTATAGACAGGGAATGCATGAGTTACTTGCCCCACTGCTTTATGTTCTCCAAGTTGACGTAGAACGCCTTTCAGAAATACGAAAGACTTATGAAGATCACTTCACTGACAGATTTGATGGCCTTTTCTGTCAAGAGAATGATCTTTCTTACAGGTTTGATTTTAGAAAATCTTCAGACTCAGAGGATGAACTTGGCTTAGGTGGAAATGCATCAAAAATCCAAAGTCTTGATGAGCTTGATCCCAAGATACAGGCCGTTGTATTGCTAGGTGATGCTTATGGGGCTGAAGGTGAACTCGGCGTTGTATTATCTGAGAAATTCATGGAACATGATGCTTACTGTATGTTTGATGCACTACTGAATGGGTCTAATGCTTCAGTTGCAATGGCCGATTTTTTCTCTTATTCCCCCTGTAGCGGTCCCATACTGGCTTGCCGCCTCCATCTTGTTGATCTCGGGGTTGAACCTCAATACTTTGCTCTCCGCTGGTTACGACTGAGGACAACACAGATTCTGGGTTTCTTTGATCTACAGTCATCTCGAGGAGCATTTATCTCAGCTATGGCAGTAGCAATGTTACTTCATTTAAGATCTTCACTACTTGCAACTGAAAATCCTACAATTTGTCTCCAAAGGTTATTAAAGTTCCCAGATAACATGGATATTAAAAAGCTACTGGAGAAGGCTAAATCATTGCAGGATCTTGCACTGAGTACTGTTATTGCATCCTCAACACCTTCATTTGTGGGGTTTCATAACCACCGTAAATCAAGTATTGCAAGAACTACGACCCTTCCATCTGAATCAGTTTCTCCGAAAACTCCTCTGAAGATGTTAACTGATAGATACTGGGAAGAAATGTGGAGAGTTGCCCACAGGAGTGAAGAACTTAAGCTAGATGAAGTGGAAAATCAGGTTCCAACACAGAAAAAGAGATGGACAGAAAAGGTTAAGTTCAGTTTAAGAAGAGCAGAATCTGACCCTTCTTCATCAAAGATCAAGGGTGGTAAAAAGGAACCCGAGGAAACTATTAGGCGTAGTTTGTTAGAAGATCTTAGTAAGGAACTTGACTCGCAGGAAGATACAAAAAACCTGCAGTGTCCGGATAATATATGCCAGCAGGATTATCGTTCTGTAGCAGGTGAAGTGGAGCACCGGGATGATGTCTCTGAAGGCAGCAACAATTGCTTTGCTGAGGATAGAACTCTAAGTGTAAATACTGTCGCTGAAGAAACTTCATCCATAATTTCTAGCACAGCTAGTCCTCCTAACGAGGCCTATGATCTCAGAAATGACTCTGAGAAAAGTAGTGTTGGGTCTAATTTATCCCTTCATGAAATTAATGAAATTTCACATATTAGTCCGGTTGATTCGCCTCTTCCAGTCTCTGATCACCCTGAGAACTTCTCTCAGATGTCAGGGTGCAACAAAAATTCCACGGGAAACTCAGCCGCACAGTCGAAGGAGAGAAAACAGAATAAATTCCAGTGGTTTTGGAAGCTTGGAAGAAACAATGTTGAGCTTTTGTCTGGTAAAAGTGGAGGTGCTTCTGAGGCCGTACAACCTGCCAATTGTGATAATCAAAGTAATGTTATACCTTCTTCTACTGCTGATGGGCGTTGTAGTCCTGATAGTAGTACAGGGAATTCTGTAGACCAGAATGTCCCGGGCACTTTGAGGGATATTGGGCTGTCCATGCTTGAGCATATTAAGGTGATAGAGTCTGCATTCCAACAAGAGAGGGGCAAGGTCAATGAAAATGATACTGCAATGACAGCTCTCAAGGAGCTTCGCAAAATCAGCAATCTTTTGTCTGAGATGTTGCATTGA	2349	0.4381	MPPAMVVPPLPEESSSVFSPLSSGVVSPRSASENRRLGDLRGLQWRMCLGVLPSSSSIDDIRRATANSRRRQAMLNYHALYMQYASLRGRLLVDPHIPKDGSSPLNLVMDNPLSQNPDSTWSRFFRNAELERMVDQDLSRLYPEHGSYFQTPGCQGLLRRILLIWCLRHPECGYRQGMHELLAPLLYVLQVDVERLSEIRKTYEDHFTDRFDGLFCQENDLSYRFDFRKSSDSEDELGLGGNASKIQSLDELDPKIQAVVLLGDAYGAEGELGVVLSEKFMEHDAYCMFDALLNGSNASVAMADFFSYSPCSGPILACRLHLVDLGVEPQYFALRWLRLRTTQILGFFDLQSSRGAFISAMAVAMLLHLRSSLLATENPTICLQRLLKFPDNMDIKKLLEKAKSLQDLALSTVIASSTPSFVGFHNHRKSSIARTTTLPSESVSPKTPLKMLTDRYWEEMWRVAHRSEELKLDEVENQVPTQKKRWTEKVKFSLRRAESDPSSSKIKGGKKEPEETIRRSLLEDLSKELDSQEDTKNLQCPDNICQQDYRSVAGEVEHRDDVSEGSNNCFAEDRTLSVNTVAEETSSIISSTASPPNEAYDLRNDSEKSSVGSNLSLHEINEISHISPVDSPLPVSDHPENFSQMSGCNKNSTGNSAAQSKERKQNKFQWFWKLGRNNVELLSGKSGGASEAVQPANCDNQSNVIPSSTADGRCSPDSSTGNSVDQNVPGTLRDIGLSMLEHIKVIESAFQQERGKVNENDTAMTALKELRKISNLLSEMLH*	783

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev01g2628	782	MobiDBLite	consensus disorder prediction	497	517	-	-
	Aev01g2628	782	MobiDBLite	consensus disorder prediction	628	662	-	-
	Aev01g2628	782	SMART	tbc_4	32	377	IPR000195	-
	Aev01g2628	782	Gene3D	-	318	413	-	-
	Aev01g2628	782	MobiDBLite	consensus disorder prediction	586	611	-	-
	Aev01g2628	782	MobiDBLite	consensus disorder prediction	693	729	-	-
	Aev01g2628	782	SUPERFAMILY	Ypt/Rab-GAP domain of gyp1p	39	295	IPR035969	-
	Aev01g2628	782	MobiDBLite	consensus disorder prediction	1	33	-	-
	Aev01g2628	782	PANTHER	TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	2	308	-	-
	Aev01g2628	782	SUPERFAMILY	Ypt/Rab-GAP domain of gyp1p	321	406	IPR035969	-
	Aev01g2628	782	Gene3D	putative rabgap domain of human tbc1 domain family member 14 like domains	114	299	-	-
	Aev01g2628	782	PANTHER	YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN	353	720	-	-
	Aev01g2628	782	PANTHER	TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	353	720	-	-
	Aev01g2628	782	MobiDBLite	consensus disorder prediction	15	30	-	-
	Aev01g2628	782	PANTHER	YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN	2	308	-	-
	Aev01g2628	782	MobiDBLite	consensus disorder prediction	686	729	-	-
	Aev01g2628	782	MobiDBLite	consensus disorder prediction	637	662	-	-
	Aev01g2628	782	Pfam	Rab-GTPase-TBC domain	131	189	IPR000195	-
	Aev01g2628	782	ProSiteProfiles	TBC/rab GAP domain profile.	35	361	IPR000195	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev01g2628	Aev-Chr1	29349355	29352936	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev01g2628	K18469		-	gmx:100816501	941.028

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev01g2628	01	29349355	29352936	Aev04g1319	04	8909271	8913820	PCT