Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1189 ATGATCCATAACAACGGTGGTAGTTGGAAAGGGGAAGAGGGGGTGGTTGTGGCAATGGGGGAGGAGGAGGAGGAGGAGCCGAGCCAGCTGAAGAGGGCGATGATTGATGCCTCTGCTGGGGCTATTTCTGGTGCTATATCACGTACAGTTACCTCTCCCCTTGATGTTATTAAGATCAGGTTCCAGGTTCAGCTAGAGCCCACATCTTCCTGGGGTTTACTACGCAAGGATTTGTCTACACCATCGAAATATACTGGTATGCTTCAAGCAAGCAAAGATATTTTTAGAGAAGAAGGCATTCGGGGCTTCTGGCGGGGCAATGTGCCAGCTTTGCTCATGGTTATGCCATATACAGCCATACAATTCACTGTTCTACACAAGTTGAAGAGTTTGGCCTCTGGTTCTTCAAAAACAGAGAATCACATTAATTTGAGCCCTTATCTATCCTATTTGAGTGGGGCATTAGCTGGGTGTGCAGCTACTGTAGGATCATATCCGTTTGATCTTCTCCGTACCATATTAGCTTCTCAAGGTGAACCTAAGGTGTATCCAAACATGAGGTCAGCATTCCTTGATATTGTGCAGACCCGTGGCATCCGAGGCATGTATGCTGGATTGTCACCAACACTAGTTGAGATTATACCTTATGCAGGCCTACAATTTGGCACCTATGATACATTTAAACGTTGGGCCATGGCATGGAATCGCGCTCAATACCCGAACGCCACTGCAGAAGATAGCCTCTCCAGCTTTCAACTTTTCCTTTGTGGGTTGGCTGCTGGAACATGTGCTAAACTTGTTTGTCATCCACTTGATGTGGTGAAGAAAAGATTTCAGATTGAAGGTCTACAAAGGCATCCAAGATATGGAGCTAGGGTTGAACATCGTGCATACAGAAATATGTTTGATGCCATGCAACGGATATTACAAGCAGAAGGTTGGGCTGGTCTGTATAAAGGGATAGTCCCATCAACTGTTAAAGCTGCACCAGCTGGTGCTGTAACTTTTGTAGCTTATGAATTAACATCAGATTGGTTGGAGTCTATTTTGACTTGA 1056 0.4536 MIHNNGGSWKGEEGVVVAMGEEEEEEPSQLKRAMIDASAGAISGAISRTVTSPLDVIKIRFQVQLEPTSSWGLLRKDLSTPSKYTGMLQASKDIFREEGIRGFWRGNVPALLMVMPYTAIQFTVLHKLKSLASGSSKTENHINLSPYLSYLSGALAGCAATVGSYPFDLLRTILASQGEPKVYPNMRSAFLDIVQTRGIRGMYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNRAQYPNATAEDSLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYRNMFDAMQRILQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYELTSDWLESILT* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1189 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 144 230 IPR018108 -
Aev04g1189 351 PANTHER SOLUTE CARRIER FAMILY 25 26 350 - -
Aev04g1189 351 Gene3D Mitochondrial carrier domain 28 348 IPR023395 -
Aev04g1189 351 Pfam Mitochondrial carrier protein 248 346 IPR018108 -
Aev04g1189 351 Pfam Mitochondrial carrier protein 36 132 IPR018108 -
Aev04g1189 351 Pfam Mitochondrial carrier protein 145 231 IPR018108 -
Aev04g1189 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 131 IPR018108 -
Aev04g1189 351 SUPERFAMILY Mitochondrial carrier 31 340 IPR023395 -
Aev04g1189 351 PRINTS Mitochondrial carrier protein signature 159 177 IPR002067 GO:0055085
Aev04g1189 351 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Aev04g1189 351 PRINTS Mitochondrial carrier protein signature 257 279 IPR002067 GO:0055085
Aev04g1189 351 PRINTS Mitochondrial carrier protein signature 49 63 IPR002067 GO:0055085
Aev04g1189 351 PRINTS Mitochondrial carrier protein signature 36 49 IPR002067 GO:0055085
Aev04g1189 351 PRINTS Mitochondrial carrier protein signature 106 126 IPR002067 GO:0055085
Aev04g1189 351 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 26 350 - -
Aev04g1189 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 345 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1189 Aev-Chr4 7617561 7622694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1189 16 351 Organic Solute Cotransporters AT3G21390 75.294 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1189 K15108 - gmx:100803750 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1189 04 7617561 7622694 Aev04g1189 04 7617561 7622694 ECH
Aev01g2954 01 31369561 31371736 Aev04g1189 04 7617561 7622694 PCT