Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2954 ATGGAGGAGCCTAGCCAAGTGAGGCGTGCCATGATTGATTCCTCTGCTGGGGCAATTTCTGGTGGGATATCAAGAACAGTCACCTCACCCCTCGATGTTATTAAGATTAGATTCCAGGTTCAACTAGAGCCCACATCTTCTTGGGCTTTACTTCGCAAGGATTTGGCTGCTCCATCAAAATATACCGGTATTTTTCAAGCCAGCAGAGATATTTTTAGAGAAGAAGGCTTACCGGGCTTTTGGCGGGGCAACGTACCGGCTTTGCTCATGGTTATGCCATATACAGCCATACAGTTTACAGTTTTACACAAGTTGAAGACTCTTGCCTCTGGTTCTTCCAAGACAGAGAATCACACTAATTTGAGCCCTTATCTATCCTATGTCAGTGGAGCATTAGCTGGGTGTGCAGCTACTGTAGGATCATACCCCTTTGATCTTCTCCGAACCATATTAGCTTCTCAGGGTGAACCAAAGGTATATCCAAACATGAGGTCAGCATTTCTTGATATCGTCCAGACTCGTGGATTCCAAGGCTTGTATTCTGGATTGTCACCTACACTAGTTGAGATCATTCCTTATGCAGGCCTACAATTTGGCACCTATGATACATTCAAGCGTTGGGCCATGGCTTGGAATCAGAGATATTCAAACTACACTTCAGAAGATGGCCTCTCAAGCTTTCAGCTTTTCATTTGTGGGTTGGCGGCTGGAACATGTGCCAAGCTTGTCTGCCATCCACTAGATGTGGTCAAGAAAAGATTTCAGATTGAGGGGCTTCAGAGGCATCCAAGATATGGAGCACGCGTTGAGCATCATGCATACAGGAACGTGCTTGATGCCATGAAAAGGATATTAAGGTTAGAGGGTTGGGCTGGTCTATACAAAGGGATACTGCCATCAACTGTTAAAGCTGCACCAGCCGGTGCTGTTACATTTGTTGCATATGAATTGACTTCTGATTGGCTTGAGTCCACTTTGACTTGA 984 0.4533 MEEPSQVRRAMIDSSAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWALLRKDLAAPSKYTGIFQASRDIFREEGLPGFWRGNVPALLMVMPYTAIQFTVLHKLKTLASGSSKTENHTNLSPYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPNMRSAFLDIVQTRGFQGLYSGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNQRYSNYTSEDGLSSFQLFICGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHHAYRNVLDAMKRILRLEGWAGLYKGILPSTVKAAPAGAVTFVAYELTSDWLESTLT* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2954 327 PANTHER SOLUTE CARRIER FAMILY 25 3 326 - -
Aev01g2954 327 SUPERFAMILY Mitochondrial carrier 10 316 IPR023395 -
Aev01g2954 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 321 IPR018108 -
Aev01g2954 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 108 IPR018108 -
Aev01g2954 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 207 IPR018108 -
Aev01g2954 327 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 3 326 - -
Aev01g2954 327 Gene3D Mitochondrial carrier domain 5 325 IPR023395 -
Aev01g2954 327 Pfam Mitochondrial carrier protein 225 322 IPR018108 -
Aev01g2954 327 Pfam Mitochondrial carrier protein 121 208 IPR018108 -
Aev01g2954 327 Pfam Mitochondrial carrier protein 14 109 IPR018108 -
Aev01g2954 327 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Aev01g2954 327 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Aev01g2954 327 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Aev01g2954 327 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Aev01g2954 327 PRINTS Mitochondrial carrier protein signature 136 154 IPR002067 GO:0055085
Aev01g2954 327 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2954 Aev-Chr1 31369561 31371736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2954 1 327 Organic Solute Cotransporters AT3G21390 74.699 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2954 K15108 - gmx:100784986 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2954 01 31369561 31371736 Aev04g1189 04 7617561 7622694 PCT