Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1132 ATGCATGCGGCAATGGTGGCATTGCTCTTGCTGCTGGCATGGAGCAATGCCGTGAGAGTCCACGGCTATGGCGATGGCCAATGTGCTCTGAATCCAACACTAGATCCAAGGCCACACAGTGTCTCAATTTTGGAGTTTGGTGCTGTTGGAGATGGTAAAACACTCAACACTCTTGCATTCCAGAATGCTGTATTCTATCTCAAGTCCTTTGCTGACAAGGGCGGCGCTCAGCTATACGTGCCGCCGGGGAAATGGCTCACCGGAAGCTTCAATCTCACGAGCCATCTTACCCTCTTTTTGGAAAAAGGTGCTGTCATTATTGGATCTCAGGACCCATCTCATTGGGATGTTATTGAACCCTTACCTTCCTATGGCCGAGGGATCGAAGTTCCTGGTGGCAGATATCAGAGCTTGATAAACGGATACAAGTTGCATGATGTGGTTGTAACAGGTAATAATGGAACCATTGATGGCATGGGATCTGTTTGGTGGGACTGGTTTAAGTCTCATTCCCTGAATCACAGCCGTCCTCATTTGATCGAACTCGTAGAATCTGATTATGTGGTAGTCTCAAATCTTACAATCTTGAATGCCCCTGCATATAGCATTCACCCAGTTTATTGCAGTCATGTACATATTCAAAATCTTTCAATTACTTCTCCTCCGGAATCCCCGTATACTGTTGGTATAGTTCCAGATTCTTCTGATCATGTTTGTATAGAAGATTGTATTGTTTCCATGGGATATGATGCGATTTCCCTCAAAAGTGGCTGGGATGAGTACGGCATTGCCTATGGCAGGCCCACCGAGGAATTACACATCAGAAGGGTGTATCTTAATGCATTTTCCGGCTCTACTCTTGCATTTGGCAGCGACATGTCTGGCGGTATTTCAAATGTTCTTGTGGAGCATGCTCTTCTTTTCGACTCAAATAGCGGAATTGAGTTCAGAACCACCAAAGGAAGAGGCGGTTATATGAAAGAAATTGTTATATCAGACATACAAATGGATAATGTCTATACTGCAATTGCCGCCAAAGGTCATTGCGGATCTCATCCCGATGACAAGTTTGATCCAAATGCCCTCCCACGATTGAATGACATCACGTTGAAGGATGTTACTGGCACAAACATCACCATTGCTGGGAGCCTTGCCGGAATCGAGGAATCTCCCTTCACCAACATATGCCTTTCCAATGTATCATTGTCTACAAATTCTGTTTCTCCTGTTACATGGGAATGCTCAAATGTCTCGGGATTTTCAGATTCTGTCCACCCAAAACCTTGTCCAGAACTTGGGAGCCCCACGAGTTCCTCCTCGTCCTGTTTCTACCTGCTGAGTATCAGTGGAAGAAAAAGTTCAGCGCTGTGA 1371 0.4544 MHAAMVALLLLLAWSNAVRVHGYGDGQCALNPTLDPRPHSVSILEFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGAVIIGSQDPSHWDVIEPLPSYGRGIEVPGGRYQSLINGYKLHDVVVTGNNGTIDGMGSVWWDWFKSHSLNHSRPHLIELVESDYVVVSNLTILNAPAYSIHPVYCSHVHIQNLSITSPPESPYTVGIVPDSSDHVCIEDCIVSMGYDAISLKSGWDEYGIAYGRPTEELHIRRVYLNAFSGSTLAFGSDMSGGISNVLVEHALLFDSNSGIEFRTTKGRGGYMKEIVISDIQMDNVYTAIAAKGHCGSHPDDKFDPNALPRLNDITLKDVTGTNITIAGSLAGIEESPFTNICLSNVSLSTNSVSPVTWECSNVSGFSDSVHPKPCPELGSPTSSSSSCFYLLSISGRKSSAL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1132 456 Gene3D - 31 423 IPR012334 -
Aev04g1132 456 PANTHER PECTIN LYASE-RELATED 5 449 - -
Aev04g1132 456 Pfam Glycosyl hydrolases family 28 137 418 IPR000743 GO:0004650|GO:0005975
Aev04g1132 456 PANTHER POLYGALACTURONASE/GLYCOSIDE HYDROLASE FAMILY PROTEIN 5 449 - -
Aev04g1132 456 SUPERFAMILY Pectin lyase-like 35 432 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1132 Aev-Chr4 7140620 7142887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1132 6 443 Glycoside Hydrolase AT3G16850 63.098 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1132 - - gmx:100777503 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1132 04 7140620 7142887 Aev04g1132 04 7140620 7142887 ECH
Aev01g2914 01 31159359 31161786 Aev04g1132 04 7140620 7142887 PCT