Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2914 ATGCTAGTGGCATTGCTACTGCTGCTGGCATTGAGCAATGAACTCAGAGTTAATGGAGATGTTGGAAGAGGGCAATGTGAGTTTAATCCAGCACTAAATCCAAGGCCACACAGTGTCTCCATTTTGGAGTTCGGTGCTGTTGGGGATGGTAAAACACTGAACACTATTGCATTCCAGAATGCCATATTCTATCTCAAGTCATTTGCTGACAAAGGTGGCGCTCAGCTTTATGTACCACCTGGAAAATGGCTCACTGGAAGCTTCAATCTTACTAGTCATCTTACCCTCTTTTTGGAAAAGGGTTCTTTCATTATTGGATCTCAGGATCCTTTGCATTGGGAAATTGTTGATCCTTTACCTTCTTATGGCCGAGGAGTCGAAGTTCCTGGGGGAAGATACCAGAGCTTGATAAATGGATACATGTTAAATGATGTGGTCATAACAGGCAATAATGGGACCATTGATGGCATGGGATTTGTTTGGTGGGAATCATTTAGGTCTCATTCGTTGAACTTTAGCCGTCCTCATCTGATTGAATTAGTGGCATCTAATAATGTGGTAGTTTCAAATCTTACATTCCTCAATGCCCCTGCATATAGCATCCACCCTGTTTATTGCAGCAATGTACATATTCAAAACATGTCAATATCTGCTCCTTCAGAATCACCTTATACCGTTGGCGTAGTACCAGATTCATCTGATAATGTTTGTATAGAGGATTGTACAATTGCCATGGGCTTTGATGCAATTGCCCTGAAAAGTGGCTGGGATGAGTATGGCATTGCCTATGGCAGGCCGGCCAAGAATGTACACATTAGAAGGGTGCATCTGCAATCTTCTTCCGGCTCTACTCTTGCGTTCGGCAGCGACATGTCCGGCGGCATCTCGGATGTTCTTGTGGAGCACGCTCACCTTCACGACTCCAAGAGTGGCATTGAGTTCAGAACCACAAGAGGTAGAGGTGGTTACATGAAGGACATTGTCATAACAAGCATAGAAATGGAGAATATCTACACAGCACTTGGTGCCAGAGGCCATTGTGGGTCTCATCCTGATGACAAATTTGACCCTGATGCTCTCCCACACTTGGATCACATCATTTTGCAACATATGATCGGCACAAACATTACTATTGCTGGAAGCTTTGCTGGACTAGAAGAATCTCCATTCACTGATATTTGTCTTTCCAACATAAACTTTTCTGTGAATCCTGTTTCTCCTATTACTTGGGAATGCTCAAATGTCTCTGGATTTTCAGATTCTGTTGTTCCTAAACCTTGTCCTGACCTTGAGAAATCTTCAGATCCTTCCTCATCTTGTTTCTCCTTGACGAGTATGGAAGGAAAAGCTGCGACAGTAATGTGA 1365 0.4337 MLVALLLLLALSNELRVNGDVGRGQCEFNPALNPRPHSVSILEFGAVGDGKTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGSFIIGSQDPLHWEIVDPLPSYGRGVEVPGGRYQSLINGYMLNDVVITGNNGTIDGMGFVWWESFRSHSLNFSRPHLIELVASNNVVVSNLTFLNAPAYSIHPVYCSNVHIQNMSISAPSESPYTVGVVPDSSDNVCIEDCTIAMGFDAIALKSGWDEYGIAYGRPAKNVHIRRVHLQSSSGSTLAFGSDMSGGISDVLVEHAHLHDSKSGIEFRTTRGRGGYMKDIVITSIEMENIYTALGARGHCGSHPDDKFDPDALPHLDHIILQHMIGTNITIAGSFAGLEESPFTDICLSNINFSVNPVSPITWECSNVSGFSDSVVPKPCPDLEKSSDPSSSCFSLTSMEGKAATVM* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2914 454 PANTHER POLYGALACTURONASE/GLYCOSIDE HYDROLASE FAMILY PROTEIN 2 445 - -
Aev01g2914 454 Gene3D - 28 421 IPR012334 -
Aev01g2914 454 SUPERFAMILY Pectin lyase-like 33 429 IPR011050 -
Aev01g2914 454 Pfam Pectate lyase superfamily protein 39 96 IPR024535 -
Aev01g2914 454 Pfam Glycosyl hydrolases family 28 136 416 IPR000743 GO:0004650|GO:0005975
Aev01g2914 454 PANTHER PECTIN LYASE-RELATED 2 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2914 Aev-Chr1 31159359 31161786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2914 1 450 Glycoside Hydrolase AT3G16850 61.641 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2914 - - gmx:100802343 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2914 01 31159359 31161786 Aev01g2914 01 31159359 31161786 ECH
Aev01g2914 01 31159359 31161786 Aev04g1132 04 7140620 7142887 PCT