Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1089 ATGAGTACCATGAAGTTTTGCCGCGAATGCAACAACATTCTGTACCCTAAAGAAGATAGGGAGCAGAAGATTCTTCTCTACGCATGCCGCAATTGCGATCACCAGGAGGCTGCTGAAAACAACTGTGTGTATAGAAATGAGATACATCATTCTGTTGGAGAGCGCACTCAGGTGTTGCAGGATGTAGCTGCGGATCCAACTCTTCCTCGCACTAAGGCGGTTCGCTGCGTACAATGTAACCATGGAGAAGCTGTCTTCTTCCAGAGGGAAGAGAGGGTATTCCATGCCACAGCTAGGGTATCCACGATCCTCATGATTTTCTTGCCTGTAAGTTATGCAATTAAGGGATGTTCCCCTTGTTCTGTGTGTGTACATGGACTGATCGGAAGGCAACAGCAAGAGGGGAAGAAGGAATGA 417 0.4748 MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAAENNCVYRNEIHHSVGERTQVLQDVAADPTLPRTKAVRCVQCNHGEAVFFQREERVFHATARVSTILMIFLPVSYAIKGCSPCSVCVHGLIGRQQQEGKKE* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1089 138 SUPERFAMILY Zinc beta-ribbon 1 48 - -
Aev04g1089 138 ProSitePatterns RNA polymerases M / 15 Kd subunits signature. 6 32 IPR019761 -
Aev04g1089 138 SMART rpol9cneu 5 58 IPR001529 GO:0006351
Aev04g1089 138 Pfam RNA polymerases M/15 Kd subunit 4 38 IPR001529 GO:0006351
Aev04g1089 138 SUPERFAMILY Zinc beta-ribbon 51 93 - -
Aev04g1089 138 PANTHER DNA-DIRECTED RNA POLYMERASE 1 93 IPR012164 GO:0006351
Aev04g1089 138 Gene3D - 47 104 - -
Aev04g1089 138 Gene3D - 1 46 - -
Aev04g1089 138 PANTHER DNA-DIRECTED RNA POLYMERASE SUBUNIT 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1089 Aev-Chr4 6826387 6828313 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1089 K03017 - vvi:100253286 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2882 01 31007347 31008091 Aev04g1089 04 6826387 6828313 PCT