Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1034 ATGTTCTTCAGCGGCGATCCATCGACACGTAAGCGTGTTGATTTAGGTGGTCGCAGCTCGAAGGAGAGGGACCGGAAGAATCTCCTGGAGCAAACGCGATTGGAGCGAAATCGCCGCTTGTGGTTGCGCCAGCAAAACACTGCTGCGCTCAAGATTCAGAAATGCTTCAGAGGGAGAAAGGTTGTCAGAACTGAACAGTCTAAGCTTCGAGAGAAATTCTATAAAACCTATGGGAAGTACTGCCAGAATTTAGACAGGGGTGCTTTTGGTCCCGATTCTGATTTCCTCCGCCAGTTCCTCTATTTCTTTAATGCAGAAAATATTGATGATGTTTTAGTTCTAGTGCAAATTTGCCGATTCCTTCAACAGTTTGTTCAAGAGAGTGGCGATATTGTGGGACTTTTTGCTGGTGTGGATTACTCATCCACGTGTGCTTTGGTGAACCATCGAGTGAAGCAATTTGTATATATTTGTCTTCGTGCCATATATCAGAATAGAAATCAGTTGAAGGATCAACTTTTATTGACTCCTGAAGAATCTAAAGCATCAGCTGTTTCTTTATTGGAAGTTCTAGTATTGTTGATAGATACCAAACTGCCTTGGAGCTGTAATGTAGTAGGATATCTGTATCAAAACAATGCATTGGGCCTACTTAGAGATATTATTCTTACAGGAAAGGATAATGCAGAAAATTGTATTTACAGTGCAAAAGGATCATCATTGGAGCGTTTGCTTACAGTTGTAATACATCACACTGGTCAGAAGCCATGTAGGTGTTCACATATTGATCCAAGATACAGCTTCACTTCACAAATCCTCACAATTCCTTATTTGTGGGATATTTTTTCAAACTTAAAACTGGTTTTTGCAACACAGGGCCTGAGCCAACATTACGTTCATCAAATGGCAACTGTCGTACCAAATCTGATCAGTTTTCTACCTAAGGATATATCAGATGAAATTCCTACCTATGCCTGTCTGCTTGGAAACATATTAGAAACTTCTGGAATTGCTTTGTCTCAACCTGACTGTTCATTTGTTGCGGCTATAAACCTTGCTGCTGTTGCTACGTTTTTGCTTGAGGCACACGCTGCACACCCATCTTTGAAAACATCGAGGAGTAGAGAAAATTCTATGATTGCTGAGGATGATATAACTGGTGATGATGTAATTATGGAAGTAGCTTTGGATAGGAAACTGGAGCAACAAATTCGCAATGCCATAGATACTCGCCTCCTTTTGCAACTGACAAATATATTATTTAGAGATATTTCATGTGTCAATGGTTCAGATTATGGGCCAGATGATCAGGAGGTTGCAGCTGTTGGTGCAGTCTGTGGGTTTCTATATGTTACTTTCAACACATTTCCACTTGAAAGGATAGTGACTGTACTTGCCTACAGAACTGAACTTGTTCCCATTCTTTGGAGTTTTATGAAGCGGTGCCATGAGAATAAAAAATGGTTGTCTTTGTCAGAGCGGTTATCATACCTCTCAGGTGATTCACCTGGTTGGCTGTTACCTCTGGCTATATTCTGTCCTGTCTACAAGCATATGCTCATGATAGTTGATAATGAGCAATTCTATGAGCAGGAGAAACCACTATCCCTGAAGGATATTAGAAGCCTCATTATTATGTTGAAACAGGTTCTGTGGCAGCTACTATGGGTGAATCACACATCATCTGCTAATTCGGTAAAATCTGTTCCTGCTAGCACAGCTAGCAAAAGGCAGTCTATAGAAGCCATCCAACAGAGGGTTAGCAATGTAGTCTCTGAGCTCCTCTCCCAGCTTCAGGATTGGAACAATCGACGAGAGTTTACATCCCCCACTGACTTCCATGCTGATGGGGTGAATGAATCCTTTATCTCTCAGGCTGTAATAGAAAATACAAGAGCAAATGAAGTTTTGAAGCAAGCTGCTTTGCTGATACCATTTACAAGCAGGGCTCAAATATTCACTTCTCAACTAGCTGCTGTTCGGCAAAGACATGGATCTCAACATGTATTTACTAGAAGTCGATTCAGAATAAGACGAGATCATATTTTGGAAGATGCTTACAATCAAATGAGTCAATTGTCAGAAGATGATCTTCGAGGATCAGTACGTGTGACCTTTGTCAATGAATTTGGAGTTGAGGAGGCTGGAATCGATGGAGGTGGAATATTCAAAGATTTCATGGAGAACATAACACGTGCAGCGTTTGATGTGCAATACGGATTATTTAAGGAAACAGCGGATCACCTGCTTTATCCTAATCCTGGATCTGGAATGATTCATGAACAACATCTACAGTTTTTCCACTTTCTTGGTATACTTCTTGCTAAGGCTATGTTTGAAGGAATTCTGGTTGATTTACCATTTGCTACATTCTTTCTGAGCAAATTGAAACAAAAACACAACTATTTGAATGACTTACCTTCCTTGGACCCAGAATTATATCGTCACCTTATATTTCTAAAGCATTATGAGGGAGACATTTCGGAGTTGGAACTATACTTTGTTATAGTAAACAATGAGTATGGAGAGCAAACTGAAGAGGAGCTGCTTCCAGGGGGAAAAAATATACGTGTCACTAATGAGAATGTCATTACTTTCATCCATCTTGTAGCCAATCATCGCTTGAACTTTCAGATACGTCAACAAAGTTCTCATTTCCTAAGAGGATTTCAGCAACTTATTCAGAAGGATTGGATTGATATGTTTAATGAGCATGAACTTCAGCTTCTGATATCAGGTTCACTTGACAGCTTGGATATTGATGATCTGCGGCTGCATACAAACTATGCGGGAGGTTATCATAGCGAGCATTATGTGATTGAGATGTTCTGGGAAGTTCTGAAAGGCTTTTCATTGGAAAACAAGAAAAAATTCTTGAAGTTTGTGACAGGTTGCTCTCGGGGACCATTGCTTGGATTCCGATATCTTGAACCTTTGTTTTGCATACAAAGGGCTGGTGGTGATGAAGCTCTAAACAGATTACCAACAGCAGCTACTTGTATGAATTTGCTAAAGATTCCTCCTTATAGCAGTAAGGAGCAACTGGAAACCAAATTGCTTTACGCTATAAGTGCTGGTGCTGGCTTCGACTTGAGTTAA 3099 0.4037 MFFSGDPSTRKRVDLGGRSSKERDRKNLLEQTRLERNRRLWLRQQNTAALKIQKCFRGRKVVRTEQSKLREKFYKTYGKYCQNLDRGAFGPDSDFLRQFLYFFNAENIDDVLVLVQICRFLQQFVQESGDIVGLFAGVDYSSTCALVNHRVKQFVYICLRAIYQNRNQLKDQLLLTPEESKASAVSLLEVLVLLIDTKLPWSCNVVGYLYQNNALGLLRDIILTGKDNAENCIYSAKGSSLERLLTVVIHHTGQKPCRCSHIDPRYSFTSQILTIPYLWDIFSNLKLVFATQGLSQHYVHQMATVVPNLISFLPKDISDEIPTYACLLGNILETSGIALSQPDCSFVAAINLAAVATFLLEAHAAHPSLKTSRSRENSMIAEDDITGDDVIMEVALDRKLEQQIRNAIDTRLLLQLTNILFRDISCVNGSDYGPDDQEVAAVGAVCGFLYVTFNTFPLERIVTVLAYRTELVPILWSFMKRCHENKKWLSLSERLSYLSGDSPGWLLPLAIFCPVYKHMLMIVDNEQFYEQEKPLSLKDIRSLIIMLKQVLWQLLWVNHTSSANSVKSVPASTASKRQSIEAIQQRVSNVVSELLSQLQDWNNRREFTSPTDFHADGVNESFISQAVIENTRANEVLKQAALLIPFTSRAQIFTSQLAAVRQRHGSQHVFTRSRFRIRRDHILEDAYNQMSQLSEDDLRGSVRVTFVNEFGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKETADHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDLPFATFFLSKLKQKHNYLNDLPSLDPELYRHLIFLKHYEGDISELELYFVIVNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNEHELQLLISGSLDSLDIDDLRLHTNYAGGYHSEHYVIEMFWEVLKGFSLENKKKFLKFVTGCSRGPLLGFRYLEPLFCIQRAGGDEALNRLPTAATCMNLLKIPPYSSKEQLETKLLYAISAGAGFDLS* 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1034 1032 CDD HECTc 674 1030 IPR000569 GO:0004842
Aev04g1034 1032 SMART hect_3 692 1032 IPR000569 GO:0004842
Aev04g1034 1032 Gene3D Hect, E3 ligase catalytic domain 917 1031 - -
Aev04g1034 1032 PANTHER BNAC01G43970D PROTEIN 1 1032 - -
Aev04g1034 1032 ProSiteProfiles HECT domain profile. 694 1032 IPR000569 GO:0004842
Aev04g1034 1032 ProSiteProfiles IQ motif profile. 45 72 IPR000048 GO:0005515
Aev04g1034 1032 Gene3D Hect, E3 ligase catalytic domain 799 878 - -
Aev04g1034 1032 MobiDBLite consensus disorder prediction 1 22 - -
Aev04g1034 1032 Pfam HECT-domain (ubiquitin-transferase) 730 1032 IPR000569 GO:0004842
Aev04g1034 1032 SUPERFAMILY Hect, E3 ligase catalytic domain 662 1025 IPR035983 GO:0004842
Aev04g1034 1032 Gene3D Hect, E3 ligase catalytic domains 675 913 - -
Aev04g1034 1032 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 1 1032 IPR044611 GO:0000209|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1034 Aev-Chr4 6398805 6412800 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1034 K10589 - gmx:100787467 1739.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1034 04 6398805 6412800 Aev04g1034 04 6398805 6412800 ECH
Aev01g2838 01 30717656 30726837 Aev04g1034 04 6398805 6412800 PCT