Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2838 ATGTTCTTCAGCGGTGATCCTTCTACCAGGAAGCGCGTCGATTTGGGCGGTCGCAGTTCGAAGGAGAGGGACCGCAAGAACCTTCTTGAACAGACGCGAGTTGAACGCAACCGTCGATTATGGTTGCGCCAGCAGAACTCTGCTGTACTGAAAATTCAGAAATGCTTCAGAGGGAGAAAAGTTGTCAGAACTGAACACTCTAAGTTTCGAGAGCAGTTCTATAAAGTCTATGGGAAGTATTGCCAGAATGTAGACAGGAGTTCTTTTGGGCTGGAATCAGATTTCCTCCGACAATTCCTTTATTTCTTTAAGGCAGAAAATATAGATGATTTTTTAGTTCTTGTGCAAATTTGCCGATTGCTTCTGCGGTTTATTCAAGAAGATGGGGACATTGTGAGTCTTTTTGCTGGTGTGGATTACTCATCTGCTTGTGGTTTGGTGAACCATAGAGTGAAACAACTTGTATATGCTTGTATTCATGCTCTGCATCAGAATAGAAATCAGTTGAAGGATCAACTTTTATTGAGTCCTGAAGAACTGAATGTGTCAGCTGTACCTTTATTGGAAGCTTTAGTATTGTTAATAGATCCCAAATTGCCATGGAGCTGCAAGATAGTAGGATATCTCTTTCAAAATAATGCCTTAAGCCTACTCAGAGAGACTATTCTTACAGGAAAGGATGATGCAGACAATTTTTCCATTGGAAAGGGATCATCATTGGAGCGTGTGCTTATGGTGGTAATTCATCACATTGGTCAGAAGCCATGTATCTGTTCCGATACTACTAATCCAAGATATAGCTTTGCATCACAGATCATTACAATTCCTTTCTTGTGGCATCTTTTCCCAAACCTACGACAGGCTTTTGAAGCACAGGGTATCAACCACCATTACATACATTATATGGCATCATTTGGGCAAAATCTAATCAATTTGCTACCTATGGATATATCAAATCAATTCCCTAGCTATGCTTGTATGCTTGGAAATATATTAGAAACTGCTGGAATTGCTCTGTCTCAGCCTGCCTGTTCATTTGATATGGCCTTAGACCTTGCTGCTGTTGCTACATTTTTGTTGGAGGCACTCCCATCCGTAAAAGCATCTGATAATAAAGAAAGTTCTATGGTTCTTGAGGATGATATGGTTGGAGATGATGAAGTAGTTGAAGTAGCTTTGGACAGGAAATTGGAGCAGCAGATATGTAATGCTATAAATCCTCGCTTCCTTCTACAATTGACAAATATTCTATTTAGAGAGATTTCATCTGTGAATGGTTCAGAGTACGGACCAGATGATAGAGAGGTGGCAGCTGTGGGTGCAGTGTGTGGGTTCTTATATGTTACCTTCAGCAAACTGCCACTCGAACGGATTATGACTGTGCTTGCATATAGAACTGAACTTGTTCCTATGCTTTGGAATTTTATAAAGCGTTGCCACGAGAATAAGAAATGGTCATCTTTATCAGAGTGGTTATCAAAAATATCAGGTGATGCACCTGGTTGGCTATTACCTCTGGCTGTATTCTGTCCTGTGTACAAGCACATGCTTACGATAGTTGATAATGAAGAATTTTATGAGCAGGAGAAACCACTGTCTCTGAAGGATATTAGAAGCCTCATCATTATATTGAGACAGGCTCTGTGGCAGTTACTGTGGGTGAATCATAATACAACTGCTAATTCTGTAAAATCTGTTTCGGTTAGTTCAGCTAGTAAGCGGCAGTCTGTTGAAGCTATTCAACAGAGGGTTAGCATTGTAGTTTCTGAGCTTCTTTCACAGCTGCAAGATTGGAACAACAGGCGGGAGTTTACATCCCCCAGTGACTTCCATGCTGATGGGGTGAATGACTTCTTTATCTCTCAGGCGCTAATAGAAAATACACGAGCAAATGAAGTTTTGAAGCAGGCTCCTTTCTTGATACCATTTACTAGCAGGGTTAAAATATTCTCTTCTCAGCTAGCTGCAGTTAGACAAAGAGATGGATCTCAGGCTGTATTTACTCGAAACCGGTTCAGAATAAAACGAGATCGTATTTTGGAAGATGCTTATAATCAAATGAGTCAGTTGTCAGAAGATAATCTTCGTGGAATGGTTCGTGTAACTTTTGTCAATGAATTTGGCGTTGAAGAGGCTGGAATTGATGGTGGTGGAATATTCAAAGATTTTATGGAAAACATCACACGTGCTGCCTTTGATGTGCAGTATGGATTATTCAAGGAAACAGCAGATCACCTGCTTTATCCTAATCCTGGTTCAGGAATGATACATGAACAACATTACCAGTTTTTCCACTTTCTTGGTACTCTTCTTGGAAAGGCTATGTTTGAAGGGATTCTGGTTGATATACCATTTGCTACATTCTTCTTGAGCAAACTGAAACAAAAGTACAACTATTTGAATGACTTGCCTTCCTTGGACCCAGAGTTATATCGTCATCTTATTTTTCTTAAGCATTATGAGGGTGACATTTCAGAGTTGGAATTATACTTTGTTGTAGTAAACAATGAATATGGAGAGCAAACAGAGGAGGAATTGCTCCCAGGGGGTAGGAACCTACGTGTCACTAATGACAATGTCATTACTTTTATTCATCTTGTAGCTAATCATCGCTTGAATTTTCAGATACGTCAACAAAGCTCTCATTTCTTGAGGGGATTTCAGCAACTTATTCAGAAGGATTGGATTGATCTGTTCAATGAGCATGAACTTCAGCTTCTGATATCAGGTTCACTTGACAGCTTGGATGTTGATGATCTGCGGGAGCATACCAACTATGCAGGAGGCTATCATAGTGATCACTATGTGATTGAGATGTTTTGGGAAGTTCTGAAAGGCTTTTCATTGGAAAACAGGAAGAAATTTCTGAAGTTTGTGACAGGTTGCTCTCGTGGACCATTGCTTGGTTTCCGACATCTTGAACCTTTGTTTTGCATACAAAGGGCTGCTGGTACTGCTTCTGAGGAAGCTCTGGATCGATTACCAACATCGGCTACTTGTATGAATCTATTAAAGCTTCCGCCTTATAAAAGTAAGGAGCAATTGGAAACCAAATTGTTGTATGCCATAAATGCTGATGCTGGCTTTGATTTAAGCTAA 3099 0.4017 MFFSGDPSTRKRVDLGGRSSKERDRKNLLEQTRVERNRRLWLRQQNSAVLKIQKCFRGRKVVRTEHSKFREQFYKVYGKYCQNVDRSSFGLESDFLRQFLYFFKAENIDDFLVLVQICRLLLRFIQEDGDIVSLFAGVDYSSACGLVNHRVKQLVYACIHALHQNRNQLKDQLLLSPEELNVSAVPLLEALVLLIDPKLPWSCKIVGYLFQNNALSLLRETILTGKDDADNFSIGKGSSLERVLMVVIHHIGQKPCICSDTTNPRYSFASQIITIPFLWHLFPNLRQAFEAQGINHHYIHYMASFGQNLINLLPMDISNQFPSYACMLGNILETAGIALSQPACSFDMALDLAAVATFLLEALPSVKASDNKESSMVLEDDMVGDDEVVEVALDRKLEQQICNAINPRFLLQLTNILFREISSVNGSEYGPDDREVAAVGAVCGFLYVTFSKLPLERIMTVLAYRTELVPMLWNFIKRCHENKKWSSLSEWLSKISGDAPGWLLPLAVFCPVYKHMLTIVDNEEFYEQEKPLSLKDIRSLIIILRQALWQLLWVNHNTTANSVKSVSVSSASKRQSVEAIQQRVSIVVSELLSQLQDWNNRREFTSPSDFHADGVNDFFISQALIENTRANEVLKQAPFLIPFTSRVKIFSSQLAAVRQRDGSQAVFTRNRFRIKRDRILEDAYNQMSQLSEDNLRGMVRVTFVNEFGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKETADHLLYPNPGSGMIHEQHYQFFHFLGTLLGKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEGDISELELYFVVVNNEYGEQTEEELLPGGRNLRVTNDNVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIQKDWIDLFNEHELQLLISGSLDSLDVDDLREHTNYAGGYHSDHYVIEMFWEVLKGFSLENRKKFLKFVTGCSRGPLLGFRHLEPLFCIQRAAGTASEEALDRLPTSATCMNLLKLPPYKSKEQLETKLLYAINADAGFDLS* 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2838 1032 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 1 1032 IPR044611 GO:0000209|GO:0061630
Aev01g2838 1032 PANTHER BNAC01G43970D PROTEIN 1 1032 - -
Aev01g2838 1032 Gene3D Hect, E3 ligase catalytic domain 914 1031 - -
Aev01g2838 1032 Gene3D Hect, E3 ligase catalytic domain 796 875 - -
Aev01g2838 1032 MobiDBLite consensus disorder prediction 1 28 - -
Aev01g2838 1032 SUPERFAMILY Hect, E3 ligase catalytic domain 662 1024 IPR035983 GO:0004842
Aev01g2838 1032 CDD HECTc 670 1030 IPR000569 GO:0004842
Aev01g2838 1032 Gene3D Hect, E3 ligase catalytic domains 672 910 - -
Aev01g2838 1032 Pfam HECT-domain (ubiquitin-transferase) 727 1032 IPR000569 GO:0004842
Aev01g2838 1032 ProSiteProfiles HECT domain profile. 691 1032 IPR000569 GO:0004842
Aev01g2838 1032 MobiDBLite consensus disorder prediction 11 28 - -
Aev01g2838 1032 SMART hect_3 689 1032 IPR000569 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2838 Aev-Chr1 30717656 30726837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2838 K10589 - gmx:100789933 1757.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2838 01 30717656 30726837 Aev01g2838 01 30717656 30726837 ECH
Aev01g2838 01 30717656 30726837 Aev04g1034 04 6398805 6412800 PCT