Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2495 ATGCCTGGATTCATTGCTGGTAATAAGAGATTCGCTGAGCCAAATATGTGTTTTACTAGTTTGGCCAATAAGGAAAAACCAACTCTTTCGAAAAGCAATCATTGTGTGAGCTTTGATGCTCTGGATAATAATGATAGCTCTATTCTACCTGGGCTGCCTGATGATGTTTCAAAGTATTGCCTAGCACTTGTGCCTCGTTCTGAATTCCCATCTATGGCTGGTGTCTGTAAGAGATGGAGGCACTTTATTCAAAGCAAAGAATTCATAACTGTGCGAAAATTGGCTGGGGTAGTTGAGGAATGGCTTTACATATTAACTGCTGATAGTGGCGGAAAAGGAAGCCACTGGGAGGTTATGGATTGCCTGGGTCATAATCGCCGATCTCTTCCACCAATGCCTGGTCCAGCAAAGGCTGGGTTTGGGGTGGTGGTTCTTAATGGAACACTTCTTGTTATTGCCGGCTATTCTGCAGTTGATGGAACTGCTTCGGAGGCCTCAGCAGAGGTTTACCAATATAGTTCTTGCCTCAACAGCTGGAGACGATTATCAAACATGAATGTGGCTCGGTATGACTTTGCTTGTGCTGAGGTCAATGGTTTGGTTTATGCTGTTGGAGGCTATGGGGTTGAAGGCAACAGTCTCTCCAGTGCCGAGGTGTATGACCCAGATACTAACAAGTGGACGCTGATCGAGAGCCTTCGCCGCCCCAGATGGGGTTGCTTTGCCTGCGGATTCGAGGGGAAACTCTATGTCATGGGCGGAAGGTCAAGCTTTACAATCGGAAACTCCAAGTGTGTCGACATATACAACCCTGAGATGCACAGCTGGCGTGAGATGAAGAATGGATGTGTCATGGTAACTGCTCATGCAGTGCTTGAAAAGAAGTTGTTCTGCATGGAGTGGAAGAACCAGAGGAAGTTAGCAATATTCAATCCAGAGGACAGTTCATGGAAGATGGTGCCTGTACCTTTGACAGGAAGCTCAAGCATTGGGTTTAGATTTGGGATATTGGATGGTAAGCTTTTGCTGTTCTCATTGCAGGAGGAACCTACATACAGGACCTTGTTGTATGATCCAAATGCAGCACCAGGGTCAGAGTGGCAGACTTGTGAGATCAAACCTTCTGGTTTGTGCTTGTGCAGTGTAACAATCAAGGCATGA 1161 0.4625 MPGFIAGNKRFAEPNMCFTSLANKEKPTLSKSNHCVSFDALDNNDSSILPGLPDDVSKYCLALVPRSEFPSMAGVCKRWRHFIQSKEFITVRKLAGVVEEWLYILTADSGGKGSHWEVMDCLGHNRRSLPPMPGPAKAGFGVVVLNGTLLVIAGYSAVDGTASEASAEVYQYSSCLNSWRRLSNMNVARYDFACAEVNGLVYAVGGYGVEGNSLSSAEVYDPDTNKWTLIESLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKCVDIYNPEMHSWREMKNGCVMVTAHAVLEKKLFCMEWKNQRKLAIFNPEDSSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLQEEPTYRTLLYDPNAAPGSEWQTCEIKPSGLCLCSVTIKA* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2495 386 SUPERFAMILY F-box domain 45 89 IPR036047 GO:0005515
Aev03g2495 386 SMART kelc_smart 248 296 IPR006652 GO:0005515
Aev03g2495 386 SMART kelc_smart 200 247 IPR006652 GO:0005515
Aev03g2495 386 SMART kelc_smart 148 199 IPR006652 GO:0005515
Aev03g2495 386 Gene3D - 86 384 IPR015915 GO:0005515
Aev03g2495 386 PANTHER KELCH REPEAT F-BOX PROTEIN 1 386 - -
Aev03g2495 386 SUPERFAMILY Kelch motif 99 345 IPR015915 GO:0005515
Aev03g2495 386 SMART fbox_2 52 92 IPR001810 GO:0005515
Aev03g2495 386 PANTHER OS02G0202900 PROTEIN 1 386 IPR045887 -
Aev03g2495 386 Pfam Kelch motif 240 280 IPR006652 GO:0005515
Aev03g2495 386 Pfam Kelch motif 188 233 IPR006652 GO:0005515
Aev03g2495 386 Pfam Kelch motif 138 186 IPR006652 GO:0005515
Aev03g2495 386 Pfam F-box domain 51 88 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2495 Aev-Chr3 25925182 25926480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2495 52 231 Miscellaneous Gene Families AT4G33900 28.497 4.28e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2495 - - gmx:100815474 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2007 03 22873485 22874804 Aev03g2495 03 25925182 25926480 PCT