Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2007 ATGCATGGTTTTGTTCCTGGAAAGAAGAGATTTACTGACTCAAACATGTGTTTGACCAATTTGGCCAATCAAGAAAAATTAACTCGTTCACAAAACGATCATTGCTTATCCACTAAGGCACCGAACAACGGCGATAGCCCCATTCTACCTGGGCTGCCTGATGACGTGGCAAAGCATTGCCTTGCACTTGTGCCTCGTTCCCACTTCCCAGCTTTGGGTGGTGTCTGTAAGAGATGGAGGTTGTTTATTCAAAGCAAAGAGTTTATCACTGTGCGAAAATTGGCTGGGATGACTGAGGAACGGCTCTATTTCTTAACAATGGATACTTGTGAAGGAGTTCATTGGGAGGTTATGGATTGTATTGATCATAAATGCCGATCTCTTCCACCGATGCCTGGTCCAGAAAGGGCTGGGTTTGGTGTAGTGGCTCTTAATGGAAAACTTATTGTCGCCGCTGGCTTTTCAGACATCGATGGAACTACTGTTGCCTCAGCAGAGGTTTACCAGTACGATTCTTTGCTCAACAGTTGGAGCAGACTATCAAACATGAATGTGGCTCGATATGACTTTGCTTGTGCCGAAGTCAATGGCTTGGTCTATGCTGCGGGAGGTTATGGGGAGAATGGCGATATTCTCTCAAGTGCTGAGGTGTATGACCCTGATACGAACAAGTGGACACTGATAGAGAGCCTTCGACGCCCGAGATGGGGTTGCTTTGCTTGTTCATTCGACGGTAACCTCTATATCATGGGTGGAAGGTCAAGCTTTACCATTGGGAACTCCAAGTTCATCGATATATATAACCCTAAGAGGCACAGCTGGTCTGAGAATAAGAATGGCTGTGTTATGATCACAGCTCATGCAGTGTTGGGAAAGAAGTTATTTGCTATGGAATGGAAGAACCAGAGGAAGCTAGCAATATACAGTCCAGAGGACAATTCATGGAAAGTGGTACCAGTGCCGCTAACTGGGAGCTCGAGTATCGGTTTTCGATTCGGGACATTCAATGGAAAGCTGTTGCTGTTCTCACTGGAGGCAGAAGTTGGTTATAAAACCTTGCTATATGATCCAAATGCAGCTGTGGGATCAGAGTGGCAAGTTTGTGACATAAAGCCATCTGGTTTGTGCTTGATCAGTATAACAATCAAGGCATGA 1155 0.4537 MHGFVPGKKRFTDSNMCLTNLANQEKLTRSQNDHCLSTKAPNNGDSPILPGLPDDVAKHCLALVPRSHFPALGGVCKRWRLFIQSKEFITVRKLAGMTEERLYFLTMDTCEGVHWEVMDCIDHKCRSLPPMPGPERAGFGVVALNGKLIVAAGFSDIDGTTVASAEVYQYDSLLNSWSRLSNMNVARYDFACAEVNGLVYAAGGYGENGDILSSAEVYDPDTNKWTLIESLRRPRWGCFACSFDGNLYIMGGRSSFTIGNSKFIDIYNPKRHSWSENKNGCVMITAHAVLGKKLFAMEWKNQRKLAIYSPEDNSWKVVPVPLTGSSSIGFRFGTFNGKLLLFSLEAEVGYKTLLYDPNAAVGSEWQVCDIKPSGLCLISITIKA* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2007 384 PANTHER OS02G0202900 PROTEIN 1 384 IPR045887 -
Aev03g2007 384 Pfam F-box domain 51 87 IPR001810 GO:0005515
Aev03g2007 384 Pfam Kelch motif 186 231 IPR006652 GO:0005515
Aev03g2007 384 Pfam Kelch motif 136 184 IPR006652 GO:0005515
Aev03g2007 384 SUPERFAMILY F-box domain 42 124 IPR036047 GO:0005515
Aev03g2007 384 Pfam Kelch motif 235 276 IPR011498 GO:0005515
Aev03g2007 384 SUPERFAMILY Kelch motif 113 343 IPR015915 GO:0005515
Aev03g2007 384 SMART kelc_smart 198 245 IPR006652 GO:0005515
Aev03g2007 384 SMART kelc_smart 147 197 IPR006652 GO:0005515
Aev03g2007 384 PANTHER KELCH REPEAT F-BOX PROTEIN 1 384 - -
Aev03g2007 384 Gene3D - 85 378 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2007 Aev-Chr3 22873485 22874804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2007 52 229 Miscellaneous Gene Families AT4G33900 30.457 8.30e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2007 - - gmx:100802912 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2007 03 22873485 22874804 Aev03g2007 03 22873485 22874804 ECH
Aev03g2007 03 22873485 22874804 Aev03g2495 03 25925182 25926480 PCT