Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0481 ATGGAGAAGGCGTTGCGCTCACTTGATGAAGCCGTTTGGGAGGACCTTCTGGGAACCTACCACCGTATATTGCAGCTCATACTTGAAAAGTTCCAGCAGAAATTCTTCTCATATATACATACATACACAATAATAATGGCTTTGTCCATGGCAACAATTCCACCTCCACTGCTATTATCCTCCACAGCCACCACCAACCATGGCCACACACGCCTTATCCACTTGTTGAACGACCCTGTTCCCATTTCCCAGCTCAAGCAAATTCATGCTCAAATGCTACGCACCATTGACACCAACAGCCCACATGCTCTGTTTCTCTGCAGCAGAGTTCTTCACCACTCCTCTTTGGCTGACATTGACTATGCCACTCGAGTTTTTCATCACTTTGGTAACCCCAATTCTTTCATGTGGAACACTCTCATAAGAGCCTATGCAAGAAGCACCAACCAAAAGCACAAGGCCATGGAGCTTTACAGAGCAATGATCATGAAACAAGAAGAAATTGCTCATCCTGATAACCACACATTCCCTTTTGTTCTCAAGGCATGTGCTTACTTGTTTGCTCTTTGTGAAGGGAAACAGGTTCATGCCCACATCTTCAAACTTGGGTTTGAGTCTGACACTCATATTTGTAACAGCTTGATTCATTTCTATGCAACATGTGGGTTTCTAGACTTGGCAGAGAAAATATTCAAAAACATGCCTTTTAGGAGTGAGGTTTCATGGAATGTCATGATTGATTCTTATGCAAGTGCTGGAGAGTTTGACACTGCATTGAAAATGTTTGGTGAAATGCAGAAATTTCATGACCCTGATGGTTATACTATGCAGAGTGTTATTAGTGCCTGTGCTGGTTTAGGAGCTCTGTCTATGGGTTTGTGGGTTCATGCTTATGTTTTGAAAACTTGTGAGAAGAATATGGCTAGTGATGTTTTGGTCAGCACTTGCTTGGTGGACATGTATTGCAAATGTGGATCAGTGGAATTTGCACAACAGGTATTTGAAAGAATGCCTATTAGGGATGTGAATTCATGGAATTCAATGATCTTGGGGTTTGCTATGCATGGCATGGCTGAGGAAGCATTGGAGTATTATGCAAGAATGGTGAATGTAGAGAGATTTGTGCCGAATTCTATTACATTTGTTGGTGTATTGAGTGCTTGCAATCACAGGGGAATGGTTAATGAGGGGCTAATGTATTTTGACATAATGACTAAGGACTACAACATTGAACCACGGTTAGAGCATTATGGATGTCTTGTTGATCTTTTCGCTCGATCCGGCCGCATCGAAGAGGCTATGAACATGGTTTCGGAAATGCCAATGAAACCAGATGCTGTAATCTGGAGGAGTATTTTGGATGGTTGTTGCAGGCAAAATGCAAGTGTTGAGCTAAGTGAAGAAATGGCCAAACAAGTGTTTGAGTCAGAGGGTAGTTCTTGTAGTGGTGGTGTTTATGTTCTCTTGTCAAAAGTCTATGCTTCAGCTAGCAGGTGGAATGATGTAGGATTGCTTAGAAAACTAATGACAGATAAGGGTGTGACCAAAGAGCCTGGTTGTAGTTTGATTGAGATTGATGGTGTAACTCATGAATTTTTTGCTGGTGACACAACACATCCTCAAAGTAAAGATATATACAAGTTCATGAATGAAATTGAGGAGAAGCTAGAATCAATAGGGTATTTACCTGATTACTCAGGAGCACCTTTGGTTGATGAGATTAATGAGGGAAAACAGAATACTATGAGGTTGCATAGTGAGAGACTAGCCATAGCTTTTGGGCTATTAAGCTCAAGGCCAGGGATTCCAATAAGAGTGTTTAAGAATCTTAGGGTGTGTAATGATTGTCACAGGGTTATCAAATTAATCTCAAGAATTTACAATGTGGAGATAATTGTAAGAGATCGTGCTCGGTTCCATCATTTTGAAGATGGAATCTGTTCTTGTAAGGATTATTGGTGA 1962 0.4118 MEKALRSLDEAVWEDLLGTYHRILQLILEKFQQKFFSYIHTYTIIMALSMATIPPPLLLSSTATTNHGHTRLIHLLNDPVPISQLKQIHAQMLRTIDTNSPHALFLCSRVLHHSSLADIDYATRVFHHFGNPNSFMWNTLIRAYARSTNQKHKAMELYRAMIMKQEEIAHPDNHTFPFVLKACAYLFALCEGKQVHAHIFKLGFESDTHICNSLIHFYATCGFLDLAEKIFKNMPFRSEVSWNVMIDSYASAGEFDTALKMFGEMQKFHDPDGYTMQSVISACAGLGALSMGLWVHAYVLKTCEKNMASDVLVSTCLVDMYCKCGSVEFAQQVFERMPIRDVNSWNSMILGFAMHGMAEEALEYYARMVNVERFVPNSITFVGVLSACNHRGMVNEGLMYFDIMTKDYNIEPRLEHYGCLVDLFARSGRIEEAMNMVSEMPMKPDAVIWRSILDGCCRQNASVELSEEMAKQVFESEGSSCSGGVYVLLSKVYASASRWNDVGLLRKLMTDKGVTKEPGCSLIEIDGVTHEFFAGDTTHPQSKDIYKFMNEIEEKLESIGYLPDYSGAPLVDEINEGKQNTMRLHSERLAIAFGLLSSRPGIPIRVFKNLRVCNDCHRVIKLISRIYNVEIIVRDRARFHHFEDGICSCKDYW* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0481 653 Gene3D Tetratricopeptide repeat domain 399 476 IPR011990 GO:0005515
Aev03g0481 653 PANTHER BNAC04G18690D PROTEIN 63 594 - -
Aev03g0481 653 Pfam PPR repeat family 238 284 IPR002885 -
Aev03g0481 653 TIGRFAM PPR: pentatricopeptide repeat domain 240 267 IPR002885 -
Aev03g0481 653 TIGRFAM PPR: pentatricopeptide repeat domain 344 377 IPR002885 -
Aev03g0481 653 Pfam E+ motif 529 552 IPR046849 -
Aev03g0481 653 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 341 376 IPR002885 -
Aev03g0481 653 Pfam PPR repeat 315 338 IPR002885 -
Aev03g0481 653 Pfam PPR repeat 416 441 IPR002885 -
Aev03g0481 653 Pfam PPR repeat 344 369 IPR002885 -
Aev03g0481 653 Pfam PPR repeat 135 162 IPR002885 -
Aev03g0481 653 Pfam PPR repeat 211 234 IPR002885 -
Aev03g0481 653 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 133 168 IPR002885 -
Aev03g0481 653 Gene3D Tetratricopeptide repeat domain 292 398 IPR011990 GO:0005515
Aev03g0481 653 Gene3D Tetratricopeptide repeat domain 83 192 IPR011990 GO:0005515
Aev03g0481 653 Gene3D Tetratricopeptide repeat domain 193 291 IPR011990 GO:0005515
Aev03g0481 653 PANTHER OS01G0913400 PROTEIN-RELATED 63 594 - -
Aev03g0481 653 Pfam E motif 462 524 IPR046848 -
Aev03g0481 653 Pfam DYW family of nucleic acid deaminases 571 653 IPR032867 GO:0008270
Aev03g0481 653 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 238 268 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0481 Aev-Chr3 3508757 3512785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0481 82 653 Glycoside Hydrolase AT3G49170 34.888 6.73e-120 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0481 - - gmx:100791183 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0481 03 3508757 3512785 Aev03g0481 03 3508757 3512785 ECH
Aev03g0481 03 3508757 3512785 Aev05g1471 05 11014659 11016461 PCT