Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1512 ATGGCCATCCACAACCATTATTCCCTCACATTCCTCATCATGATTTCTTTTGTTGTTTGTTATGGTTCTTCTTTGCTAGAGGACCCACTTATTAGTTTATGTGTTGAGGATTCTGATTACGTAGATGATGGAGGTATATTCAAGGGCTTGATCAAGCAAAGCACTGATGTTTTAAGCTTAAAGAGGTTTGGTGGCTGCACTTCTTCGCTCAAAAGGGTTAACGTCAATGATTTTGGAGCTAAAGGGGATGGCAGAACTGACGATACAAAGGCATTTAAGAAGGCATGGGAGGAAGCATGTTCTTATGGGGGATCGATTCTTGTTGTGCCCAAGATGAATTATCTACTAAAGCCAATAACCTTTTCTGGCCCTTGCAAATCCAACATAGCAGTACAGATTTCTGGAACCCTGGAAGCATCAGATAACCGAGCAGATTACAGAGAAGATCCCACACACTGGCTCACATTTGACAGTGTTCAGAAACTATCAGTTAAAGGCGGCGGGACCATCAATGGAAATGGCAACATATGGTGGAAAAACTCATGCAAAACCAACAAGAAGCTGCCATGCAAGGATGCCCCTACGGCGCTAACATTCTACAAATGCAATAATTTGGTAGTTGATGATTTGACTATAAAAAATGGGCAACAAATCCATGTTTCATTCCAAGACTCAAACTATGTCAAAGTTTCTGGTCTCACTGTGACAGCACCGGAGGATAGTCCAAACACAGATGGAATTCATGTCACAAACACCCAAAACATCCAAATTTCAAGCTCCTCTATAGGAACCGGAGATGATTGTATATCTATAGTAGATGGATCCAAGAATCTACTAGTCACAGACATTACCTGCGGTCCCGGGCATGGTATCAGCATCGGAAGCTTAGGAGCTGGGAAATCCAAGGAATTTGTTTCTGGAATAAGGGTGAATGGAGCTAAGTTTTCTGGAACTACAAATGGAGTTAGAATCAAGACATGGCAGGGAGGGTCAGGAAGTGCAAGTAGAATCAAGTTTCAGAATATTGAAATGGACAACGTGACCAACCCAATAATAATAGACCAGAACTACTGTGACCAAAAGAAACCATGCAAAAAGCAGCAATCCGCGGTTCAGATTAAAACTGTGTTGTACCAGAACATAAAAGGCACAAGTGCTTCTGACGTGGCTGTGCGGTTTGATTGCAGCAAGAGCTTTCCATGCCAGGGGATTGTATTGCAGAACGTAGGCCTCCGACGTGAAGGTGGAGGAGATGTCAAGGCTCTGTGCAATAATGTTCGGTTGTCGTACATAGGAAATGTTAGCCCTCGCTGCTCATAG 1320 0.4303 MAIHNHYSLTFLIMISFVVCYGSSLLEDPLISLCVEDSDYVDDGGIFKGLIKQSTDVLSLKRFGGCTSSLKRVNVNDFGAKGDGRTDDTKAFKKAWEEACSYGGSILVVPKMNYLLKPITFSGPCKSNIAVQISGTLEASDNRADYREDPTHWLTFDSVQKLSVKGGGTINGNGNIWWKNSCKTNKKLPCKDAPTALTFYKCNNLVVDDLTIKNGQQIHVSFQDSNYVKVSGLTVTAPEDSPNTDGIHVTNTQNIQISSSSIGTGDDCISIVDGSKNLLVTDITCGPGHGISIGSLGAGKSKEFVSGIRVNGAKFSGTTNGVRIKTWQGGSGSASRIKFQNIEMDNVTNPIIIDQNYCDQKKPCKKQQSAVQIKTVLYQNIKGTSASDVAVRFDCSKSFPCQGIVLQNVGLRREGGGDVKALCNNVRLSYIGNVSPRCS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1512 439 PANTHER ENDO POLYGALACTURONASE 7 438 - -
Aev02g1512 439 SMART pbh1 202 222 IPR006626 -
Aev02g1512 439 SMART pbh1 275 295 IPR006626 -
Aev02g1512 439 SMART pbh1 334 355 IPR006626 -
Aev02g1512 439 SMART pbh1 252 273 IPR006626 -
Aev02g1512 439 SMART pbh1 225 251 IPR006626 -
Aev02g1512 439 SMART pbh1 305 326 IPR006626 -
Aev02g1512 439 Gene3D - 66 435 IPR012334 -
Aev02g1512 439 Pfam Glycosyl hydrolases family 28 106 427 IPR000743 GO:0004650|GO:0005975
Aev02g1512 439 ProSitePatterns Polygalacturonase active site. 282 295 IPR000743 GO:0004650|GO:0005975
Aev02g1512 439 PANTHER - 7 438 - -
Aev02g1512 439 SUPERFAMILY Pectin lyase-like 71 438 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1512 Aev-Chr2 16814434 16822740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1512 30 439 Glycoside Hydrolase AT3G57510 57.583 6.64e-158 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1512 K01184 - gmx:100816917 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1512 02 16814434 16822740 Aev06g1304 06 8757348 8759691 PCT