Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0564 ATGAAGAAACAAGCGTACTCGTTCCCGGAGGAGGTTCTCGAGCATGTGTTCTCCTTCATCGTCTCCGACAAGGACCGAAGCTCGATCTCCTTGGTCTGCAAATCATGGTACGAGATCGAGCGATGGTGTAGGAGAAGGGTGTTCATAGGTAACTGCTATGCTGTGAGTCCTACGATCTTGATCAGACGGTTCCCGGAGGTGAGATCCGTCACTCTCAAGGGGAAACCGCACTTCGCGGACTTCAATCTGGTGCCTGAAGGTTGGGGAGGGTTCGCCTGTTCTTGGATCAGAGCCATGGCGGGTGCGTACCCTTGGTTGGAAGAGATCAGGCTCAAGAGAATGGTTGTGTCTGACGAGAGCTTGGAGATCATAGCCAAGTCGTTTAAGAACTTCAAGGTGCTTGTTCTCACTTCCTGTGAAGGGTTCACCACTGATGGACTCGCCGCCATTGCCGCCAATTGCAGGAATTTGAGGGAGTTGGACTTGCGGGAGAGTGAAGTGGAAGACCTTAGTGGGCATTGGCTAAGCCATTTTCCTGATTCATACACGTCCTTAGTTTCCCTTAACATCTCATGCTTAGGTAGTGAGGTCAATCTGTCTGCACTAGAGCGCCTGGTTTGTCGGTGCCCGAACCTGAAGACCCTACGCCTCAACCGCGCCGTGCCCCTTGATCGTTTGGCCAACCTTCTCCGTGGGGCGCCTCAGCTTGTCGAGCTAGGCACAGGAGCTTACACAACCGAGATGCGACCGGATGTCTTCTCAAACCTGGCAGCAGCATTCTCTGGTTGCCAGCAGCTGAAGAGCTTGTCCGGCTTCTGGGATGTGCTCCCGTCTTACCTTCCAGCTGTCTATCCTGCCTGCTCAAGGCTAACATCACTAAACTTGAGTTATGCTACAATTCAGAGCCCTGATCTCATCAAGCTTGTCTCTCAATGCCCGAGGTTGCAGAAGTTATGGGTTCTGGATTACATAGAAGATGATGGCCTAGACGTGCTTGCTGCGTCGTGTAAGGATTTGAGGGAGTTGCGGGTGTTTCCATCTGACCCATTTGGGTTGGAACCAAATGTAGCATTGACAGAGCAGGGCCTTGTTTCTGTGTCCGAAGGCTGCCCCAAGCTCCAGTCAGTTCTATATTTTTGTCGACAGATGTCTAATGCTGCCCTAAGTACGATTGCCCGGAACCGCCCTAATTTGACTCGTTTCCGGCTATGTATAATTGAGCCTCGAAGTCCAGACTACCTTACCCATCAACCTTTGGATGATGGTTTTGGAGCTATTGTACAACATTGCAAGGATCTTCGGCGCCTATCCCTTTCCGGCCTTCTTACTGACCGTGTTTTCGAGTATATTGGGAACTATGCAAAGAAGCTTGAGATGCTTTCCGTGGCTTTTGCCGGAGACAGTGATTTGGGACTCCATCACGTGCTGTCTGGGTGCGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGCGACAAAGCCCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCTTGCTCAGTGAGCTTTGGAGCGTGCAAGCTGCTGGGTCAGAAAATGCCGCGACTCAACGTCGAAGTCATCGATGAAAGAGGACCTCCAGATTCAAGGCCAGAGAGCAGCCCTGTCGAGAAGCTTTACGTGTACAGGAGTGTCGCCGGGCCGAGAGTGGACATGCCTGGTTTTGTCTGGACAATGGAAGAAGATTCAGAGTTGAGGGTTTCTTGA 1755 0.5174 MKKQAYSFPEEVLEHVFSFIVSDKDRSSISLVCKSWYEIERWCRRRVFIGNCYAVSPTILIRRFPEVRSVTLKGKPHFADFNLVPEGWGGFACSWIRAMAGAYPWLEEIRLKRMVVSDESLEIIAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLRESEVEDLSGHWLSHFPDSYTSLVSLNISCLGSEVNLSALERLVCRCPNLKTLRLNRAVPLDRLANLLRGAPQLVELGTGAYTTEMRPDVFSNLAAAFSGCQQLKSLSGFWDVLPSYLPAVYPACSRLTSLNLSYATIQSPDLIKLVSQCPRLQKLWVLDYIEDDGLDVLAASCKDLRELRVFPSDPFGLEPNVALTEQGLVSVSEGCPKLQSVLYFCRQMSNAALSTIARNRPNLTRFRLCIIEPRSPDYLTHQPLDDGFGAIVQHCKDLRRLSLSGLLTDRVFEYIGNYAKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVIDERGPPDSRPESSPVEKLYVYRSVAGPRVDMPGFVWTMEEDSELRVS* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0564 584 SUPERFAMILY RNI-like 32 533 - -
Aev02g0564 584 SMART LRR_CC_2 370 394 IPR006553 -
Aev02g0564 584 SMART LRR_CC_2 154 191 IPR006553 -
Aev02g0564 584 SMART LRR_CC_2 430 453 IPR006553 -
Aev02g0564 584 SMART LRR_CC_2 479 503 IPR006553 -
Aev02g0564 584 SMART LRR_CC_2 103 127 IPR006553 -
Aev02g0564 584 SMART LRR_CC_2 128 153 IPR006553 -
Aev02g0564 584 Gene3D Ribonuclease Inhibitor 45 575 IPR032675 -
Aev02g0564 584 Pfam Leucine Rich repeat 287 308 IPR001611 GO:0005515
Aev02g0564 584 Gene3D - 1 44 - -
Aev02g0564 584 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 5 576 - -
Aev02g0564 584 Pfam F-box 6 46 IPR041567 -
Aev02g0564 584 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 5 576 - -
Aev02g0564 584 SUPERFAMILY F-box domain 7 40 IPR036047 GO:0005515
Aev02g0564 584 SMART fbox_2 8 49 IPR001810 GO:0005515
Aev02g0564 584 Pfam Transport inhibitor response 1 protein domain 65 111 IPR041101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0564 Aev-Chr2 4351847 4354829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0564 K14485 - gmx:100809794 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0564 02 4351847 4354829 Aev02g0564 02 4351847 4354829 ECH
Aev06g0540 06 3836244 3838863 Aev02g0564 02 4351847 4354829 PCT