Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2122 ATGGCTGGCTTGAAGGTTGCATCATGCGTGGTTGTGATAATGTGCATGATGGCTGTGATGATGAGTGCACCAATGATGGTTCAAGCCGTGTCATGTGGTGACGTGACTGCGAACCTGGCACCGTGCCTATCCTATCTGATGCAGGGTGGTTCGGTGCCGGATTCGTGCTGCGGCGGAGTGAGAAACATTATGGGCGCTGCCGCCACCACCTCTGACAAACAAACCGTGTGCAAGTGTCTTCAGCAAGCTGCTAATAACTATGGCATCAATGAAGACTACGCTCAGGCCCTCCCTGGTGTTTGCAATGTCAGCGTGCCCTATAAGATCAGCCGCTCCACCAACTGTGATGAGTATAATAAAAGAAAGCGAGTGAGCCTGTCATGGTATAAGTTTCTGTTGCAGACACTATAG 411 0.5085 MAGLKVASCVVVIMCMMAVMMSAPMMVQAVSCGDVTANLAPCLSYLMQGGSVPDSCCGGVRNIMGAAATTSDKQTVCKCLQQAANNYGINEDYAQALPGVCNVSVPYKISRSTNCDEYNKRKRVSLSWYKFLLQTL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2122 136 PRINTS Plant phospholipid transfer protein signature 31 47 IPR000528 GO:0006869|GO:0008289
Aed9g2122 136 PRINTS Plant phospholipid transfer protein signature 72 87 IPR000528 GO:0006869|GO:0008289
Aed9g2122 136 PRINTS Plant phospholipid transfer protein signature 51 65 IPR000528 GO:0006869|GO:0008289
Aed9g2122 136 PRINTS Plant phospholipid transfer protein signature 88 105 IPR000528 GO:0006869|GO:0008289
Aed9g2122 136 PRINTS Plant phospholipid transfer protein signature 106 117 IPR000528 GO:0006869|GO:0008289
Aed9g2122 136 PANTHER - 7 116 IPR000528 GO:0006869|GO:0008289
Aed9g2122 136 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED 7 116 - -
Aed9g2122 136 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 117 IPR036312 -
Aed9g2122 136 SMART aai_6 32 115 IPR016140 -
Aed9g2122 136 Pfam Protease inhibitor/seed storage/LTP family 32 115 IPR016140 -
Aed9g2122 136 Gene3D - 29 118 IPR036312 -
Aed9g2122 136 CDD nsLTP1 30 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2122 Aed-Chr9 24421035 24421949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2122 4 117 Acyl Lipid Metabolism Gene Families AT5G59320 44.348 2.17e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2122 - - gmx:100306706 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2122 9 24421035 24421949 Aed2g1013 2 8013591 8015787 PCT