Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1013 ATGGCTAGCCTCAAGTTTGCATGCGTGGTTGCGGTGATGTGCATGGTTGTTGTGGTGATCAGCAGCACTGCACCCAAGGCACATGCCATCACGTGCGGGGAAGTAGCCAGATTCCTATCTCCATGCATCAACTACCTCCAGAGTCACCGTGGTAGATCATCGCCGCCGGCAACGTGCTGCAGAGGAGTGGCAAGCCTCAACCGCGCTGCCAGGACCACCGCGGACCGCCGCACCACGTGCAACTGCCTGAAGTCCGTTGCCACTGCTATTTCTAACTTAAATGCCAACAACGCAGCTTCACTCCCGGGAAGATGTAGAGTCAGGGTCGCTTACAGGATCAGCACCTCCACCAACTGCAACAGGATTAGGTAA 372 0.5618 MASLKFACVVAVMCMVVVVISSTAPKAHAITCGEVARFLSPCINYLQSHRGRSSPPATCCRGVASLNRAARTTADRRTTCNCLKSVATAISNLNANNAASLPGRCRVRVAYRISTSTNCNRIR 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1013 123 CDD nsLTP1 30 120 - -
Aed2g1013 123 Pfam Protease inhibitor/seed storage/LTP family 32 117 IPR016140 -
Aed2g1013 123 Gene3D - 29 123 IPR036312 -
Aed2g1013 123 PANTHER - 1 121 IPR000528 GO:0006869|GO:0008289
Aed2g1013 123 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 122 IPR036312 -
Aed2g1013 123 PRINTS Plant phospholipid transfer protein signature 31 47 IPR000528 GO:0006869|GO:0008289
Aed2g1013 123 PRINTS Plant phospholipid transfer protein signature 54 68 IPR000528 GO:0006869|GO:0008289
Aed2g1013 123 PRINTS Plant phospholipid transfer protein signature 110 121 IPR000528 GO:0006869|GO:0008289
Aed2g1013 123 PRINTS Plant phospholipid transfer protein signature 75 90 IPR000528 GO:0006869|GO:0008289
Aed2g1013 123 PRINTS Plant phospholipid transfer protein signature 92 109 IPR000528 GO:0006869|GO:0008289
Aed2g1013 123 SMART aai_6 32 119 IPR016140 -
Aed2g1013 123 ProSitePatterns Plant lipid transfer proteins signature. 101 122 IPR000528 GO:0006869|GO:0008289
Aed2g1013 123 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1013 Aed-Chr2 8013591 8015787 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1013 6 123 Acyl Lipid Metabolism Gene Families AT5G59320 45.763 4.58e-28 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1013 - - gmx:100775184 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2122 9 24421035 24421949 Aed2g1013 2 8013591 8015787 PCT