Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2056 ATGCAGCACAACATCTTCACTTCGATTCGTAGCATGAAAATCATGGACGGTTGTAAGGGTACGCAGGTACACGCGCTCAAACCTCTCGCCGCCGCCGCCGATCGGAGCGGCGGCGGCGGGAGTGCTGCGGAGAAAGTGTTGCATGACAATCCACTCGACAATTCCAAAGGCCAAACCGGTCGAACAAAACCGGTTTCGCCGAAGCACGACGCCGTTTTGGAGACTCTTCTCCCGTGCGGGCTTCCCGTTTCAGAGCTTCTAGAATCTTCGATCGAGCCTTCCTTGAAGCCCCTTGATTTGGTGGAAACTCTCGCCCTCGTTCATCGCAGGGCCGAGAATTGCGCGGCGCTCGAGAAATCCGAGGTTTATTTGGAGCAATGCGCGGTGTTCCGGGGCCTGCCGGATCCGAAGCTGTTCCGGCGAGGGCTTCGCGAGGCTCGGCGCCACGCGGCGGAGGTGCACGCGAAGGTCGTGCTGGCTTCGTGGCTGAGGTATGAGAGGAGAGAGGACGAGCTCGTGGGATCCAATTCGATGGATTGCTGTGGAAGAAACCTTGAGTGCTCAAAGGCTAGTTTGGTCCCCGGGTATGATCATCAATCGGTGTTTGAACGTTGTTCATGTTTTCGTAGAGAGGTAGTTAATGATTTTGTTGTTGATAACCAGGAATGTGAATGTGAATGCTCAACTTCTCATGAATATGATGAAGGTGGTGGTGGTGTTGTTGATGATGATGATAATGTTTATTTTAGCATTGGTGATAGTGAAATTAGGTGTAGGAGGTACTCTATGGCCGCGCTTTCGAGGCCGTTTGAGACAATGTTGTGTGGTGGATTTGTTGAGTGTGGGAGGGAGAGGATAAATTTCTCTCTGAATTGTGTTTCTGTTGAGGCAATGATGGCTGTTGAGGTATTTAGTAGAACCAAGAAGCTGAATCGGTTTCCTCCTAATGTTATTCTCAAGATGCTTTCTTTTGCAAATAAGTTTTGTTGTGAGGAGATGAAGAGGGCTTGTGATGCGCATTTGGCTTCTCTGGTTTTGGACATGGATGACGCAGTGTTGCTGATTGAGCATGGACTGGAGGAGACTGCACATTTGCTGGTGGCAGCTTGCTTGCAGGTGTTTCTGAGAGAGCTTCCTGGTTCGATGCAGCTTTGGAGTGTTATGAGGCTGTTTTGTAGTCCAGAGGGTATGGATAGATTGGCCCTTTCGGGGCATGTGTCTTTTGTGTTGTATTATTTTTTGAGTCAGGTTGCGATGGAGGAAGAAATGGGGTCTAACATGACTATGATGCTTTTGGAAAGATTGGGAGAGTGTGCAGTGGAATGTTGGCAGAAGCAGCTTGCTTATCACCAATTGGGGGTTGTTATGCTTGAGAGAAAGGAATACAAAGATGCACAGCATTGGTTTGAGGCTGCTGTTGAGGCAGGACATGTTTATTCTTTAGTGGGTGTTGCAAGGGCCAAGTATAAGTGTGGTCACATGCTTTCAGCATATAAGATGATAAACTCCCTGATAGAAGATTATAAGCCAGTTGGTTGGATGTATCAGGAGAGGTCTTTGTATTGCAATGGGAAGGAGAAAATGGTGGACTTGGTCTCTGCAACTGAGTTGGATCCAACTCTTTCTTTTCCATACAAATACAGGGCTGTTTCTTTGCTGGAGGAGAACAAGATTGAAGATGCCATTTCCGAAATTGATAAAATAATTGGTTTCAAGGTTTCTCCAGACTGCCTTGAGTTAAGAGCTTGGTTCTTGATTTCTATGAAGGATTATGAAGGGGCCCTCAGAGATGTCAGGGCAATTTTGACTTTGGATCCAAATTATATGATGTTCTATGGGAACATGCATGGTGGTCACTTGGTAGAACTCCTCCGTCCTGTTGCTCAGCAGTGGAGCCAAGCTGATTGCTGGATGCAATTGTATGATAGATGGTCTTCTGTCGATGATATTGGTTCTTTGGCTGTTGTACACAAAATGTTAGAAAATGACCCTGGGAAAAGTATTTTACGCTTTCGGCAATCTCTCCTTCTGTTACGGTTGAATTCTCAAAAGGCAGCCATGCGTAGTTTGCGTCTAGCTAGAAATCATTCATCTTCAGCACATGAAAGGCTTGTGTATGAAGGATGGATATTGTATGACACTGGTTATCGTGAAGAAGCATTGGCAAAAGCTGAGGAATCCATTTCTATTCAAAGGTCATTTGAAGCTTTCTTTCTCAAAGCTTATGCCTTAGCTGACTCAAGTCTTGATTCAAAATCTTCAAAGTATGTGATCAATCTCTTGGAGGAAGCTCTTAGATGCCCCTCAGATGGTCTTCGTAAAGGACAAGCACTGAATAATTTAGGGAGTGTATATGTAGATTGCGGCAAGCTGGATCTTGCTGCTGACTGCTACAAGCATGCACTTAACATCAAGCATACTCGAGCACATCAAGGGTTGGCACGTGTATATCATCTAAAAGAACAACACAAAGCTGCATATGATGAGATGACAAAACTAATAGCAAAGGCCCGGAATAATGCATCTGCTTATGAGAAACGTTCAGAATATTGTGATCGTGACATGGCGAAGAGCGATCTTAGTTTGGCAACGCAATTGGATCCCTTAAGGACTTATCCTTACAGATATAGGGCAGCAGTTTTAATGGATGATCATGAGGAAAATGAAGCAATAGCAGAACTTTCAAGGGTCATCAATTTTAAGTTAGATCTACAACTATTACATCTTCGAGCAGCATTTCATGATTCAATGGGTGATTGTGATTCTACTGTCCAAGACTGTGAAGCGGCCCTTTGTCTTGATCCTAGTCATGCTGAGACGTTAGAGCTTTGTAATAAGGCACGAGAGCAAACTAATGAACAAAAGTGA 2868 0.4522 MQHNIFTSIRSMKIMDGCKGTQVHALKPLAAAADRSGGGGSAAEKVLHDNPLDNSKGQTGRTKPVSPKHDAVLETLLPCGLPVSELLESSIEPSLKPLDLVETLALVHRRAENCAALEKSEVYLEQCAVFRGLPDPKLFRRGLREARRHAAEVHAKVVLASWLRYERREDELVGSNSMDCCGRNLECSKASLVPGYDHQSVFERCSCFRREVVNDFVVDNQECECECSTSHEYDEGGGGVVDDDDNVYFSIGDSEIRCRRYSMAALSRPFETMLCGGFVECGRERINFSLNCVSVEAMMAVEVFSRTKKLNRFPPNVILKMLSFANKFCCEEMKRACDAHLASLVLDMDDAVLLIEHGLEETAHLLVAACLQVFLRELPGSMQLWSVMRLFCSPEGMDRLALSGHVSFVLYYFLSQVAMEEEMGSNMTMMLLERLGECAVECWQKQLAYHQLGVVMLERKEYKDAQHWFEAAVEAGHVYSLVGVARAKYKCGHMLSAYKMINSLIEDYKPVGWMYQERSLYCNGKEKMVDLVSATELDPTLSFPYKYRAVSLLEENKIEDAISEIDKIIGFKVSPDCLELRAWFLISMKDYEGALRDVRAILTLDPNYMMFYGNMHGGHLVELLRPVAQQWSQADCWMQLYDRWSSVDDIGSLAVVHKMLENDPGKSILRFRQSLLLLRLNSQKAAMRSLRLARNHSSSAHERLVYEGWILYDTGYREEALAKAEESISIQRSFEAFFLKAYALADSSLDSKSSKYVINLLEEALRCPSDGLRKGQALNNLGSVYVDCGKLDLAADCYKHALNIKHTRAHQGLARVYHLKEQHKAAYDEMTKLIAKARNNASAYEKRSEYCDRDMAKSDLSLATQLDPLRTYPYRYRAAVLMDDHEENEAIAELSRVINFKLDLQLLHLRAAFHDSMGDCDSTVQDCEAALCLDPSHAETLELCNKAREQTNEQK 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2056 955 Coils Coil 820 847 - -
Aed9g2056 955 SUPERFAMILY POZ domain 246 342 IPR011333 -
Aed9g2056 955 Gene3D Potassium Channel Kv1.1; Chain A 242 383 IPR011333 -
Aed9g2056 955 PANTHER ETHYLENE-OVERPRODUCTION PROTEIN 1 1 954 - -
Aed9g2056 955 Pfam Tetratricopeptide repeat 776 804 IPR019734 GO:0005515
Aed9g2056 955 Gene3D Tetratricopeptide repeat domain 633 851 IPR011990 GO:0005515
Aed9g2056 955 Gene3D Tetratricopeptide repeat domain 852 955 IPR011990 GO:0005515
Aed9g2056 955 PANTHER ETO1-RELATED 1 954 IPR044631 GO:0010105
Aed9g2056 955 SMART tpr_5 904 937 IPR019734 GO:0005515
Aed9g2056 955 SMART tpr_5 701 734 IPR019734 GO:0005515
Aed9g2056 955 SMART tpr_5 775 808 IPR019734 GO:0005515
Aed9g2056 955 SMART tpr_5 575 608 IPR019734 GO:0005515
Aed9g2056 955 Gene3D Tetratricopeptide repeat domain 436 613 IPR011990 GO:0005515
Aed9g2056 955 SUPERFAMILY TPR-like 539 901 IPR011990 GO:0005515
Aed9g2056 955 SUPERFAMILY TPR-like 448 727 IPR011990 GO:0005515
Aed9g2056 955 ProSiteProfiles TPR repeat profile. 775 808 IPR019734 GO:0005515
Aed9g2056 955 MobiDBLite consensus disorder prediction 33 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2056 Aed-Chr9 23806974 23813864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2056 776 945 Glycosyltransferase AT3G04240 28.729 4.32e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2056 - - gmx:100794758 1363.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2056 9 23806974 23813864 Aed2g1079 2 8704346 8710256 PCT